RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 CCNT2O60583 730 aaKnown RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PRMT3O60678 531 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 RNH1P13489 461 aaKnown RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 JAK1P23458 1154 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CERS1P27544 350 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 NAB1Q13506 487 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 EXT1Q16394 746 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 MROH9Q5TGP6 573 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZNF468Q5VIY5 522 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 FAM180AQ6UWF9 173 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 RAPH1Q70E73 1250 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 MDS2Q8NDY4 140 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CCT6BQ92526 530 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CSF3RQ99062 836 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CD244Q9BZW8 370 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PLEKHB1Q9UF11 243 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 URADA6NGE7 173 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 LRRC14BA6NHZ5 514 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 A8MUA0 341 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 PRAMEF2O60811 474 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 KERAO60938 352 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 H2AFYO75367 372 aaKnown RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 SUPT3HO75486 399 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 CLEC3AO75596 197 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 ALDOAP04075 364 aaKnown RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 C2P06681 752 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 EDN3P14138 238 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 MST1P26927 711 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 CRABP2P29373 138 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 HSD17B3P37058 310 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 PLA2G16P53816 162 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 STXBP1P61764 594 aaKnown RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 AP2B1P63010 937 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 SKP1P63208 163 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 CHIT1Q13231 466 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 NIPAL1Q6NVV3 410 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 LRRC70Q7Z2Q7 622 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 CYP4X1Q8N118 509 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 KRT78Q8N1N4 520 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 RNF175Q8N4F7 328 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 BCORP1Q8N888 145 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 STAG3L4Q8TBR4 150 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 UBTD2Q8WUN7 234 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 GPR78Q96P69 363 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 SNX15Q9NRS6 342 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 OLAHQ9NV23 265 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 DNAJC13O75165 2243 aa13.12□□□□□ -0.31
TNFAIP2-207ENST00000560562 LRBAP50851 2863 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CACNA1CQ13936 2221 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CLGNO14967 610 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CLDN1O95832 211 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CD96P40200 585 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 KCNK10P57789 538 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 TBC1D1Q86TI0 1168 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 FAM47BQ8NA70 645 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 TTLQ8NG68 377 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 OR2L5Q8NG80 312 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 NR4A3Q92570 626 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CAPS2Q9BXY5 557 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 REXO4Q9GZR2 422 aaKnown RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 ACSS3Q9H6R3 686 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 CLK4Q9HAZ1 481 aaKnown RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 NMRAL1Q9HBL8 299 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 PRDM7Q9NQW5 492 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 OSGIN2Q9Y236 505 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP2-207ENST00000560562 ANKDD1BA6NHY2 528 aa13.1□□□□□ -0.31
TNFAIP2-207ENST00000560562 GABRR3A8MPY1 467 aa13.1□□□□□ -0.31
TNFAIP2-207ENST00000560562 PSMD12O00232 456 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP2-207ENST00000560562 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms