RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PGS1Q32NB8 556 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 AMZ1Q400G9 498 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 PAGE3Q5JUK9 113 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 GUSBP11Q6P575 273 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 DHDDSQ86SQ9 333 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 MCATQ8IVS2 390 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 OR4N4Q8N0Y3 316 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 D2HGDHQ8N465 521 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 KIF2BQ8N4N8 673 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 CSNK1A1LQ8N752 337 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 Q8N9G6 341 aaPredicted RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 KCT2Q8NC54 265 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 OR4D9Q8NGE8 314 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 OR2I1PQ8NGU4 316 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 CDC26Q8NHZ8 85 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 KLHL6Q8WZ60 621 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 GTF2H4Q92759 462 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 TM4SF18Q96CE8 201 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 FCRL4Q96PJ5 515 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 TEFMQ96QE5 360 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 GPATCH1Q9BRR8 931 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 THTPAQ9BU02 230 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 FAIM2Q9BWQ8 316 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 NPLQ9BXD5 320 aaPredicted RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 KLHL25Q9H0H3 589 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 LRRN3Q9H3W5 708 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF768Q9H5H4 540 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 SYNPO2LQ9H987 977 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 CLK4Q9HAZ1 481 aaKnown RBP8.18□□□□□ -1.1
TRAF3-209ENST00000560463 FAM60AQ9NP50 221 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 SPAG4Q9NPE6 437 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 MIEF1Q9NQG6 463 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 SOHLH2Q9NX45 425 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 TAS2R7Q9NYW3 318 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 EHD3Q9NZN3 535 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 PDP2Q9P2J9 529 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 PHF11Q9UIL8 331 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 BTNL2Q9UIR0 455 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 AP3M1Q9Y2T2 418 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 PCDHGA7Q9Y5G6 932 aa8.18□□□□□ -1.1
TRAF3-209ENST00000560463 KNTC1P50748 2209 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 A0A096LPI6 279 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 FITM1A5D6W6 292 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 C9JVG2 144 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 RNASET2O00584 256 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 P2RX6O15547 441 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 AKAP10O43572 662 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 B3GALT2O43825 422 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 TMPRSS11DO60235 418 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 PRAMEF10O60809 474 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 DNAJA2O60884 412 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SCN2BO60939 215 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 EIF2S1P05198 315 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ZCCHC18P0CG32 403 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 PIM1P11309 404 aaPredicted RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 NELFEP18615 380 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SLC6A2P23975 617 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ACP1P24666 158 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 BUD31P41223 144 aaPredicted RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 RAB8AP61006 207 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 BTN3A2P78410 334 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 CCL7P80098 99 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SLAMF1Q13291 335 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 FAM53BQ14153 422 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 CCDC6Q16204 474 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 FAM214AQ32MH5 1076 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 GLIPR1L2Q4G1C9 344 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 WASHC2DQ5SRD0 308 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 LRIF1Q5T3J3 769 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 C6orf163Q5TEZ5 329 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 OR4F3Q6IEY1 312 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 CYB5D1Q6P9G0 228 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 PGM2L1Q6PCE3 622 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SLC2A7Q6PXP3 512 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 DLEU7Q6UYE1 221 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF793Q6ZN11 406 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ULK2Q8IYT8 1036 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 FBXW8Q8N3Y1 598 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 OR7A2PQ8NGA2 310 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 OR8K5Q8NH50 307 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 GOT1L1Q8NHS2 421 aaPredicted RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 IFI44Q8TCB0 444 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 N4BP2L2Q92802 583 aaPredicted RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 GFM2Q969S9 779 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 PPCDCQ96CD2 204 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SLC41A2Q96JW4 573 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 CCDC115Q96NT0 180 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 GBP5Q96PP8 586 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 CDRT15Q96T59 188 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 MACROD1Q9BQ69 325 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 LRFN3Q9BTN0 628 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms