RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NEURL3Q96EH8 262 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PDXPQ96GD0 296 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 SCARF2Q96GP6 870 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 HRASLS5Q96KN8 279 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 COG8Q96MW5 612 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 NODALQ96S42 347 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 OR51B5Q9H339 312 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 DUSP21Q9H596 190 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 SOX17Q9H6I2 414 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 PREBQ9HCU5 417 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 A4GALTQ9NPC4 353 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 KRT84Q9NSB2 600 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 VNN3Q9NY84 501 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PDP1Q9P0J1 537 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 SPASTQ9UBP0 616 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 HCN2Q9UL51 889 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 SH2B3Q9UQQ2 575 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 POFUT2Q9Y2G5 429 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 GMPPBQ9Y5P6 360 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 MAGED1Q9Y5V3 778 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 NUMA1Q14980 2115 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 A0A1W2PPV9 198 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 IGLON5A6NGN9 336 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MYO1GB0I1T2 1018 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PLPP1O14494 284 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MID1O15344 667 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PDPK1O15530 556 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PLRG1O43660 514 aaKnown RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 KLHL18O94889 574 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PCDH8O95206 1070 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 KLK1P06870 262 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 IL3P08700 152 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CDK4P11802 303 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MYOGP15173 224 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CCNA2P20248 432 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 EFNA1P20827 205 aaPredicted RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 NDUFS1P28331 727 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PCSK6P29122 969 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PKLRP30613 574 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 AHRP35869 848 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CRATP43155 626 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MAPK12P53778 367 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 DSTNP60981 165 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CDK6Q00534 326 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 IL5RAQ01344 420 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 GUCA2AQ02747 115 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PRDX1Q06830 199 aaKnown RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 FOXC1Q12948 553 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 NPRL3Q12980 569 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 IRF4Q15306 451 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 RAB30Q15771 203 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.26□□□□□ -0.93
RTF1-206ENST00000560447 SAXO2Q658L1 398 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ADNP2Q6IQ32 1131 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ANKRD26P1Q6NSI1 321 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 REEP3Q6NUK4 255 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ANKRD54Q6NXT1 300 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MTSS1LQ765P7 747 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CEP68Q76N32 757 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 SPRED2Q7Z698 418 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 VTCN1Q7Z7D3 282 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 CYP4Z1Q86W10 505 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ANKRD13BQ86YJ7 626 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 HDDC3Q8N4P3 179 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ATG16L2Q8NAA4 619 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 SRFBP1Q8NEF9 429 aaKnown RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 DENND6BQ8NEG7 585 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 FCGR1BQ92637 280 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 MOAP1Q96BY2 351 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ZBED6CLQ96FA7 236 aaPredicted RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 ZNF300Q96RE9 604 aaPredicted RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 GABRG3Q99928 467 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 FAIM2Q9BWQ8 316 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 SPNS1Q9H2V7 528 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 RUBCNLQ9H714 662 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 DDX31Q9H8H2 851 aaKnown RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 FANCEQ9HB96 536 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PLGRKTQ9HBL7 147 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PALMDQ9NP74 551 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 ZDHHC4Q9NPG8 344 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 PLCXD1Q9NUJ7 323 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 TAC3Q9UHF0 121 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 SLC17A4Q9Y2C5 497 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 TDRKHQ9Y2W6 561 aaKnown RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 TMEM98Q9Y2Y6 226 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 LYVE1Q9Y5Y7 322 aa9.26□□□□□ -0.93
RTF1-206ENST00000560447 NUP214P35658 2090 aaPredicted RBP9.26□□□□□ -0.93
RTF1-206ENST00000560447 TMEM247A6NEH6 219 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 ZNF99A8MXY4 864 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 hCG_2039718K7EN88 272 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 TNFRSF11BO00300 401 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PLK4O00444 970 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 NDUFS4O43181 175 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 GCM2O75603 506 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 ETFAP13804 333 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms