RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 OR5T3Q8NGG3 340 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 SELENOMQ8WWX9 145 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 METTL21AQ8WXB1 218 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 PEX11GQ96HA9 241 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 CNDP1Q96KN2 507 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 ARHGAP9Q9BRR9 750 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 VN1R1Q9GZP7 353 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 C12orf65Q9H3J6 166 aaKnown RBP12.27□□□□□ -0.45
NEDD8-208ENST00000560427 LANCL2Q9NS86 450 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 AHSPQ9NZD4 102 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 MKL2Q9ULH7 1088 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 DAPP1Q9UN19 280 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 MRPS33Q9Y291 106 aaKnown RBP12.27□□□□□ -0.45
NEDD8-208ENST00000560427 MMACHCQ9Y4U1 282 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 ITPR1Q14643 2758 aa12.27□□□□□ -0.45
NEDD8-208ENST00000560427 DSPP15924 2871 aaKnown RBP12.27□□□□□ -0.45
NEDD8-208ENST00000560427 SERTM1A2A2V5 107 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 CLDN4O14493 209 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 PLPP1O14494 284 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 SOCS6O14544 535 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 FFAR3O14843 346 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ATXN7O15265 892 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 GPR42O15529 346 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 KLHL41O60662 606 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ALOX12BO75342 701 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ULK1O75385 1050 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 C8orf89P0DMQ9 161 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ATP5A1P25705 553 aaKnown RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 CERS1P27544 350 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 NEK2P51955 445 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 POLE2P56282 527 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 DCAF10Q5QP82 559 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 MFSD4BQ5TF39 518 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 OR4C11Q6IEV9 310 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 KIRREL2Q6UWL6 708 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 UBE3DQ7Z6J8 389 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 LAPTM4BQ86VI4 370 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 NUDT13Q86X67 352 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 PRSS58Q8IYP2 241 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ACOT4Q8N9L9 421 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 PLPP5Q8NEB5 264 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 METTL6Q8TCB7 284 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 EXTL1Q92935 676 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 GATA5Q9BWX5 397 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ING2Q9H160 280 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 OR51B5Q9H339 312 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 EML4Q9HC35 981 aaKnown RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 MID1IP1Q9NPA3 183 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ACSS2Q9NR19 701 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 MS4A12Q9NXJ0 267 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 G3BP2Q9UN86 482 aaKnown RBP12.26□□□□□ -0.45
NEDD8-208ENST00000560427 CFAP47Q6ZTR5 3102 aa12.26□□□□□ -0.45
NEDD8-208ENST00000560427 ARGFXA6NJG6 315 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 MANBAO00462 879 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 UBFD1O14562 309 aaKnown RBP12.25□□□□□ -0.45
NEDD8-208ENST00000560427 BIRC5O15392 142 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 JRKO75564 520 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 CRCPO75575 148 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 B3GALT4O96024 378 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 HPP00738 406 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 BPGMP07738 259 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 DHRS4L1P0CG22 281 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 SERPINB4P48594 390 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 LIM2P55344 173 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 HSD17B7P56937 341 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 FOXL2P58012 376 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 AP2B1P63010 937 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 OLR1P78380 273 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 RHAGQ02094 409 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 AIMP2Q13155 320 aaKnown RBP12.25□□□□□ -0.45
NEDD8-208ENST00000560427 RUNX2Q13950 521 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 LINC00303Q3SY05 128 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 AGBL2Q5U5Z8 902 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 ZNF793Q6ZN11 406 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 RNF165Q6ZSG1 346 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 PAGE2Q7Z2X7 111 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 OR11G2Q8NGC1 345 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 TLCD1Q96CP7 247 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 DDX31Q9H8H2 851 aaKnown RBP12.25□□□□□ -0.45
NEDD8-208ENST00000560427 ATP13A2Q9NQ11 1180 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 PRDM9Q9NQV7 894 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 RIC8BQ9NVN3 520 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 LYARQ9NX58 379 aaKnown RBP12.25□□□□□ -0.45
NEDD8-208ENST00000560427 PHF11Q9UIL8 331 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 FBXL4Q9UKA2 621 aa12.25□□□□□ -0.45
NEDD8-208ENST00000560427 A0A0A6YYD5 115 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 A0A0G2JN53 185 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 MKRN2OSH3BPM6 223 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 SAP18O00422 153 aaKnown RBP12.24□□□□□ -0.45
NEDD8-208ENST00000560427 PRMT3O60678 531 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 CEACAM4O75871 244 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 ETHE1O95571 254 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 PDYNP01213 254 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 UROSP10746 265 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 COX6A1P12074 109 aa12.24□□□□□ -0.45
NEDD8-208ENST00000560427 BSGP35613 385 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms