RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RNF31Q96EP0 1072 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 MARK4Q96L34 752 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 CATSPER2Q96P56 530 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 DEPDC7Q96QD5 511 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 CCDC106Q9BWC9 280 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 EBPLQ9BY08 206 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 NMUR2Q9GZQ4 415 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 NSRP1Q9H0G5 558 aaKnown RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 SDR39U1Q9NRG7 319 aaPredicted RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 CUTCQ9NTM9 273 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 AIG1Q9NVV5 245 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 DHCR7Q9UBM7 475 aaKnown RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 CES1P1Q9UKY3 287 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 G3BP2Q9UN86 482 aaKnown RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 ARL2BPQ9Y2Y0 163 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 TMED5Q9Y3A6 229 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 NAALAD2Q9Y3Q0 740 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 LOXL2Q9Y4K0 774 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 ATG4BQ9Y4P1 393 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 CLDN16Q9Y5I7 305 aa8.88□□□□□ -0.99
HERC1-206ENST00000559996 COPG1Q9Y678 874 aaKnown RBP8.88□□□□□ -0.99
HERC1-206ENST00000559996 CCDC187A0A096LP49 1063 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 A0A1W2PR48 441 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 URADA6NGE7 173 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 SGK494L7N484 410 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CYR61O00622 381 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 PROM1O43490 865 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 SCN2BO60939 215 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 NSA2O95478 260 aaKnown RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 NTRK1P04629 796 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CERS1P27544 350 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 EFNA3P52797 238 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 LIM2P55344 173 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CLDN8P56748 225 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 C21orf58P58505 322 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 UFM1P61960 85 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 PHC1P78364 1004 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 MC1RQ01726 317 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ACSM2AQ08AH3 577 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 SLAMF1Q13291 335 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 PTGR1Q14914 329 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 HERC3Q15034 1050 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 MPEG1Q2M385 716 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 FAM214AQ32MH5 1076 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ACSM2BQ68CK6 577 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 NXNQ6DKJ4 435 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 TRIM40Q6P9F5 258 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 PAOXQ6QHF9 649 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CYP20A1Q6UW02 462 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 C6orf89Q6UWU4 347 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ZNF517Q6ZMY9 492 aaPredicted RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 TTLL10Q6ZVT0 673 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 MED25Q71SY5 747 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 COX15Q7KZN9 410 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 MTDHQ86UE4 582 aaKnown RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 PPP1R3BQ86XI6 285 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 TREML1Q86YW5 311 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CA13Q8N1Q1 262 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 LIX1Q8N485 282 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 FITM2Q8N6M3 262 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 TMEM52Q8NDY8 209 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 SRFBP1Q8NEF9 429 aaKnown RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 RILPQ96NA2 401 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 GBP5Q96PP8 586 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 KCNC2Q96PR1 638 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 SERINC2Q96SA4 455 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 CMKLR1Q99788 373 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ZMYND15Q9H091 742 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 PFDN4Q9NQP4 134 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 NMRK1Q9NWW6 199 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 TEX10Q9NXF1 929 aaPredicted RBP8.87□□□□□ -0.99
HERC1-206ENST00000559996 SLC39A1Q9NY26 324 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 AHSPQ9NZD4 102 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 RARRES3Q9UL19 164 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 DAPP1Q9UN19 280 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ERVK-11Q9UQG0 969 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 B3GALT1Q9Y5Z6 326 aa8.87□□□□□ -0.99
HERC1-206ENST00000559996 ZNF860A6NHJ4 632 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 GABRR3A8MPY1 467 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 CAPN14A8MX76 684 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 FAM227AF5H4B4 570 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 H0YIG0 161 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 FCHO1O14526 889 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 NDUFAB1O14561 156 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 PLD2O14939 933 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 DSCR3O14972 297 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 POLR1CO15160 346 aaPredicted RBP8.86□□□□□ -0.99
HERC1-206ENST00000559996 PGRMC2O15173 223 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 CHST10O43529 356 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 PCDH7O60245 1069 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 CNOT3O75175 753 aaKnown RBP8.86□□□□□ -0.99
HERC1-206ENST00000559996 RDH16O75452 317 aa8.86□□□□□ -0.99
HERC1-206ENST00000559996 PRKRAO75569 313 aaKnown RBP8.86□□□□□ -0.99
HERC1-206ENST00000559996 DLGAP3O95886 979 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms