RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 SQLEQ14534 574 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 PHF19Q5T6S3 580 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 ISLR2Q6UXK2 745 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 CREB3L4Q8TEY5 395 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 USP7Q93009 1102 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 OSBPL11Q9BXB4 747 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 ELOVL6Q9H5J4 265 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 MEAF6Q9HAF1 191 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 PRM3Q9NNZ6 103 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 CEPT1Q9Y6K0 416 aa11.04□□□□□ -0.64
TM2D3-208ENST00000559891 MYOCOSA0A1B0GUC4 107 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 TCRBV3S1A0A5B6 114 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 C7orf72A4D263 438 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 H0YGG7 62 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 RTCAO00442 366 aaKnown RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 UGDHO60701 494 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 ULK1O75385 1050 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 MED26O95402 600 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 GBAP04062 536 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 ZNF23P17027 643 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 CDH2P19022 906 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 TCN1P20061 433 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 INHBCP55103 352 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 VSX2P58304 361 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 ARF3P61204 181 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 HPCAP84074 193 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SPIDRQ14159 915 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 TBC1D25Q3MII6 688 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 CARM1Q86X55 608 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 DNAJC22Q8N4W6 341 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 AFAP1L2Q8N4X5 818 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 AMER3Q8N944 861 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 FAM156AQ8NDB6 213 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 ZUFSPQ96AP4 578 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 C19orf60Q96EN9 201 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 F2RL3Q96RI0 385 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 OCIAD1Q9NX40 245 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 TRBC2A0A5B9 178 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 DNAJB6O75190 326 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 RFPL3O75679 317 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 GP1BAP07359 652 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SLC7A1P30825 629 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SLC5A2P31639 672 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SIM1P81133 766 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 REP15Q6BDI9 236 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 HACD2Q6Y1H2 254 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 PRSS41Q7RTY9 318 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 TSPAN14Q8NG11 270 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 PMEPA1Q969W9 287 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 APIPQ96GX9 242 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 ZFYVE21Q9BQ24 234 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
TM2D3-208ENST00000559891 COQ10BQ9H8M1 238 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 APMAPQ9HDC9 416 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 DMRT3Q9NQL9 472 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 CD300AQ9UGN4 299 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 PCDHGA11Q9Y5H2 935 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 KLK4Q9Y5K2 254 aa11.03□□□□□ -0.64
TM2D3-208ENST00000559891 A0A1W2PNU3 283 aaPredicted RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 FAM149AA5PLN7 773 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 FBP2O00757 339 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 NDUFS4O43181 175 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 H6PDO95479 791 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 ZBTB11O95625 1053 aaPredicted RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 CCL4P13236 92 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 ALDH3B2P48448 385 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 NAA20P61599 178 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 ZFP36L1Q07352 338 aaKnown RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 RFTN2Q52LD8 501 aaPredicted RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 XKR7Q5GH72 579 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 PAGE2BQ5JRK9 111 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 C8orf82Q6P1X6 216 aaPredicted RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 PAOXQ6QHF9 649 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 RNF44Q7L0R7 432 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 UBE3DQ7Z6J8 389 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 MCATQ8IVS2 390 aaKnown RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 KRT78Q8N1N4 520 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 MFSD9Q8NBP5 474 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SLC13A3Q8WWT9 602 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 LRTOMTQ8WZ04 291 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 KLHL6Q8WZ60 621 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 LZICQ8WZA0 190 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SLCO4A1Q96BD0 722 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SLC41A2Q96JW4 573 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 CDC6Q99741 560 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SLC29A3Q9BZD2 475 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 PCDHAC1Q9H158 963 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 DDX18Q9NVP1 670 aaKnown RBP11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SEMA5BQ9P283 1151 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 SNX6Q9UNH7 406 aa11.02□□□□□ -0.64
TM2D3-208ENST00000559891 AK5Q9Y6K8 562 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms