RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CEP128Q6ZU80 1094 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 ISCA2Q86U28 154 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 EXT2Q93063 718 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 TMEM125Q96AQ2 219 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 SCMH1Q96GD3 660 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 AICDAQ9GZX7 198 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 NUDT4Q9NZJ9 180 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 SUCOQ9UBS9 1254 aaKnown RBP16.62■□□□□ 0.25
TPM1-218ENST00000559281 ZNF490Q9ULM2 529 aaPredicted RBP16.62■□□□□ 0.25
TPM1-218ENST00000559281 ACOT9Q9Y305 439 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 TRGV8A0A0C4DH27 118 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 CCDC189A1A4V9 331 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 SYCE1LA8MT33 242 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 C4orf51C9J302 202 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 MAN1A2O60476 641 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 KERAO60938 352 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 FAM155BO75949 473 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 SLC35E2BP0CK96 405 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 CASP2P42575 452 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 KCNC1P48547 511 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 MLF1P58340 268 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 ALDH6A1Q02252 535 aaKnown RBP16.61■□□□□ 0.25
TPM1-218ENST00000559281 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.251e-5■■■□□ 16.7
TPM1-218ENST00000559281 TRADDQ15628 312 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 MAPKAPK3Q16644 382 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 C8orf74Q6P047 294 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 ABHD17CQ6PCB6 329 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 NFAM1Q8NET5 270 aaPredicted RBP16.61■□□□□ 0.25
TPM1-218ENST00000559281 B3GNT7Q8NFL0 401 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 THAP3Q8WTV1 239 aaPredicted RBP16.61■□□□□ 0.25
TPM1-218ENST00000559281 QRFPRQ96P65 431 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 PNO1Q9NRX1 252 aaKnown RBP16.61■□□□□ 0.25
TPM1-218ENST00000559281 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
TPM1-218ENST00000559281 SVILO95425 2214 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 UTP20O75691 2785 aaKnown RBP16.6■□□□□ 0.25
TPM1-218ENST00000559281 A0A087X1B8 175 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 ASPDHA6ND91 283 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 SUPT3HB4E1H0 165 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 K7EPI3 171 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 ZG16O60844 167 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 SUPT3HO75486 399 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 SLC25A12O75746 678 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 NEURL1O76050 574 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 MYO1DO94832 1006 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 COL8A1P27658 744 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 TPP2P29144 1249 aaPredicted RBP16.6■□□□□ 0.25
TPM1-218ENST00000559281 SERPINB1P30740 379 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 PHBP35232 272 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 PMP22Q01453 160 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 FAM83EQ2M2I3 478 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 TMEM35AQ53FP2 167 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 MED27Q6P2C8 311 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 CHSY3Q70JA7 882 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 GALNTL5Q7Z4T8 443 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 CMC1Q7Z7K0 106 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 CCDC77Q9BR77 488 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 TRIM45Q9H8W5 580 aaPredicted RBP16.6■□□□□ 0.25
TPM1-218ENST00000559281 ADGRE2Q9UHX3 823 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 DAPP1Q9UN19 280 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
TPM1-218ENST00000559281 PRAMEF4O60810 478 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 CTNSO60931 367 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 EPB42P16452 691 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 TRHRP34981 398 aaPredicted RBP16.59■□□□□ 0.25
TPM1-218ENST00000559281 MSH2P43246 934 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 ST13P50502 369 aaKnown RBP16.59■□□□□ 0.25
TPM1-218ENST00000559281 HLCSP50747 726 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 LIM2P55344 173 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 SLC7A5Q01650 507 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 MROH9Q5TGP6 573 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 PRAMEF9Q5VWM5 478 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 ARMC10Q8N2F6 343 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 TMEM132CQ8N3T6 1108 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 FAM47BQ8NA70 645 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 VMP1Q96GC9 406 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 LRRC1Q9BTT6 524 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 TBCDQ9BTW9 1192 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 TSPYL1Q9H0U9 437 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 LYRM4Q9HD34 91 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 ADAP2Q9NPF8 381 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 IGSF5Q9NSI5 407 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
TPM1-218ENST00000559281 FBXW2Q9UKT8 454 aa16.59■□□□□ 0.25
TPM1-218ENST00000559281 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
TPM1-218ENST00000559281 ANGPTL3Q9Y5C1 460 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms