RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GP1BBP13224 206 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 MAOAP21397 527 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ECHS1P30084 290 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 SERPINB9P50453 376 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ALDH18A1P54886 795 aaKnown RBP16.5■□□□□ 0.23
SMAD3-210ENST00000559092 MTTPP55157 894 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 RAB38P57729 211 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 NAA30Q147X3 362 aaPredicted RBP16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ZNF324BQ6AW86 544 aaPredicted RBP16.5■□□□□ 0.23
SMAD3-210ENST00000559092 MED27Q6P2C8 311 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 TAOK1Q7L7X3 1001 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ZNF595Q8IYB9 648 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 BEST3Q8N1M1 668 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 AMER2Q8N7J2 671 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 CEP112Q8N8E3 955 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 DNAJB8Q8NHS0 232 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ISL2Q96A47 359 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 F2RL3Q96RI0 385 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 SLX1AQ9BQ83 275 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 NECTIN3Q9NQS3 549 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 PRDM7Q9NQW5 492 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 TSC22D4Q9Y3Q8 395 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 TNPO3Q9Y5L0 923 aaKnown RBP16.5■□□□□ 0.23
SMAD3-210ENST00000559092 BLACEA4D250 179 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 SAGE2PA6NJ88 616 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 KRT38O76015 456 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 F10P00742 488 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 CRYABP02511 175 aaKnown RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 GFAPP14136 432 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 CNTFP26441 200 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 IRF9Q00978 393 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 CHSY3Q70JA7 882 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 RPS19BP1Q86WX3 136 aaKnown RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 CRLF3Q8IUI8 442 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 SCUBE1Q8IWY4 988 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 HORMAD2Q8N7B1 307 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 C7orf57Q8NEG2 295 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 NFAM1Q8NET5 270 aaPredicted RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 OR7G3Q8NG95 312 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 ZNF473Q8WTR7 871 aaKnown RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 CMTM7Q96FZ5 175 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 MAGEB10Q96LZ2 347 aaPredicted RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 UTP23Q9BRU9 249 aaKnown RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 COPS7BQ9H9Q2 264 aaPredicted RBP16.49■□□□□ 0.23
SMAD3-210ENST00000559092 LYRM4Q9HD34 91 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 OLAHQ9NV23 265 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 DAPP1Q9UN19 280 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 SLC5A6Q9Y289 635 aa16.49■□□□□ 0.23
SMAD3-210ENST00000559092 A0A0G2JN53 185 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 WIPF3A6NGB9 483 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 CYR61O00622 381 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 E2F3O00716 465 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 UGDHO60701 494 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 RASAL1O95294 804 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 RBP1P09455 135 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 COL6A2P12110 1019 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PIK3CBP42338 1070 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 MSH2P43246 934 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 MAGEA12P43365 314 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PIK3CGP48736 1102 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 LIM2P55344 173 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 TUBA3CQ13748 450 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PCBP2Q15366 365 aaKnown RBP eCLIP16.48■□□□□ 0.238e-8■■■■□ 20.6
SMAD3-210ENST00000559092 PFKFB4Q16877 469 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 LIPJQ5W064 366 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 FCRLBQ6BAA4 426 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 ADNP2Q6IQ32 1131 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 GRHL2Q6ISB3 625 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 TUBA3EQ6PEY2 450 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 ARMC10Q8N2F6 343 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 TEX9Q8N6V9 391 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 TAAR6Q96RI8 345 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 NPAS2Q99743 824 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 MS4A8Q9BY19 250 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 VPS11Q9H270 941 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PRTFDC1Q9NRG1 225 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 TMCO1Q9UM00 188 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PPIEQ9UNP9 301 aaKnown RBP16.48■□□□□ 0.23
SMAD3-210ENST00000559092 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 PCDHGA11Q9Y5H2 935 aa16.48■□□□□ 0.23
SMAD3-210ENST00000559092 A0A087WUV0 522 aaPredicted RBP16.47■□□□□ 0.23
SMAD3-210ENST00000559092 CTNSO60931 367 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 SCELO95171 688 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 CD96P40200 585 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 ARFIP1P53367 373 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 SLC13A2Q13183 592 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 ESPL1Q14674 2120 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 ZNF766Q5HY98 468 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
SMAD3-210ENST00000559092 UBE3DQ7Z6J8 389 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 IFT20Q8IY31 132 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 B3GNT7Q8NFL0 401 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 NR4A3Q92570 626 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 PAFAH2Q99487 392 aa16.47■□□□□ 0.23
SMAD3-210ENST00000559092 CDCP1Q9H5V8 836 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms