RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TM4SF18Q96CE8 201 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 SLC45A3Q96JT2 553 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 NDC1Q9BTX1 674 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 DPY30Q9C005 99 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 FBXO8Q9NRD0 319 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 TMEM45AQ9NWC5 275 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 CDV3Q9UKY7 258 aaKnown RBP17.13■□□□□ 0.33
CLPX-203ENST00000558958 CLCA2Q9UQC9 943 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 ASB4Q9Y574 426 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 CEP250Q9BV73 2442 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 A0A0A6YYC8 382 aaPredicted RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 B4E171 279 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 I3L1I5 382 aaPredicted RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 B3GALT2O43825 422 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 PRMT3O60678 531 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 CD1EP15812 388 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 IL12AP29459 219 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 TSPAN7P41732 249 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 ARSFP54793 590 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 C21orf58P58505 322 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 SKP1P63208 163 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 AGKQ53H12 422 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 FAM71E1Q6IPT2 247 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 IKBIPQ70UQ0 350 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 PPP1R3BQ86XI6 285 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 FUNDC1Q8IVP5 155 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 RIMKLAQ8IXN7 391 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 DTWD1Q8N5C7 304 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 KRTCAP2Q8N6L1 136 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 CDC26Q8NHZ8 85 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 APMAPQ9HDC9 416 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 LYARQ9NX58 379 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 CCDC167Q9P0B6 97 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 LOXL2Q9Y4K0 774 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 SCN3AQ9NY46 2000 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 ZNF860A6NHJ4 632 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 SGK494L7N484 410 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 EBAG9O00559 213 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 DNAJB6O75190 326 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 LRATO95237 230 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 IL3P08700 152 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 PRPS1L1P21108 318 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 ZFP36L2P47974 494 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 RUNX2Q13950 521 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 PWWP2BQ6NUJ5 590 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 FOXR1Q6PIV2 292 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 TTLL10Q6ZVT0 673 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 CACTIN-AS1Q8N1I8 211 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 TMEM132CQ8N3T6 1108 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 MVB12AQ96EY5 273 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 MAPKAP1Q9BPZ7 522 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 NPLQ9BXD5 320 aaPredicted RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 LYRM4Q9HD34 91 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 TEX10Q9NXF1 929 aaPredicted RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 KCMF1Q9P0J7 381 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 SRPK3Q9UPE1 567 aa17.12■□□□□ 0.33
CLPX-203ENST00000558958 EXO1Q9UQ84 846 aaKnown RBP17.12■□□□□ 0.33
CLPX-203ENST00000558958 FAM234BA2RU67 622 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 C9JVG2 144 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 H0YIG0 161 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 DSCR3O14972 297 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 POLR1CO15160 346 aaPredicted RBP17.11■□□□□ 0.33
CLPX-203ENST00000558958 AKAP10O43572 662 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 GUCY1B2O75343 617 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 RDH16O75452 317 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 TIAF1O95411 115 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 AVPR1BP47901 424 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 CLNS1AP54105 237 aaKnown RBP17.11■□□□□ 0.33
CLPX-203ENST00000558958 LIM2P55344 173 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 MC1RQ01726 317 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 KLC1Q07866 573 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 C2orf80Q0P641 193 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 KRT72Q14CN4 511 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLPX-203ENST00000558958 RHBDD2Q6NTF9 364 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 BLOC1S3Q6QNY0 202 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 RAB11FIP2Q7L804 512 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 GPR180Q86V85 440 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 TMEM126BQ8IUX1 230 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 GLB1L3Q8NCI6 653 aaPredicted RBP17.11■□□□□ 0.33
CLPX-203ENST00000558958 NUDT8Q8WV74 236 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 TESCQ96BS2 214 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 ZBTB18Q99592 522 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 CTRCQ99895 268 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 CLMPQ9H6B4 373 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 CLK4Q9HAZ1 481 aaKnown RBP17.11■□□□□ 0.33
CLPX-203ENST00000558958 DHCR7Q9UBM7 475 aaKnown RBP17.11■□□□□ 0.33
CLPX-203ENST00000558958 FBXW2Q9UKT8 454 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 DAPP1Q9UN19 280 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 MAPRE3Q9UPY8 281 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 ATG4BQ9Y4P1 393 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 PCDHB3Q9Y5E6 796 aa17.11■□□□□ 0.33
CLPX-203ENST00000558958 CCDC187A0A096LP49 1063 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 A0A1W2PR48 441 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 PROM1O43490 865 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 SCRG1O75711 98 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 KCNK5O95279 499 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms