RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 NECTIN3Q9NQS3 549 aa20.14■□□□□ 0.81
CRNDE-205ENST00000558952 PRTFDC1Q9NRG1 225 aa20.14■□□□□ 0.81
CRNDE-205ENST00000558952 CPAMD8Q8IZJ3 1885 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 IGKV3D-11A0A0A0MRZ8 115 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 DDAH2O95865 285 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 ALDOAP04075 364 aaKnown RBP20.13■□□□□ 0.81
CRNDE-205ENST00000558952 GP1BBP13224 206 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 MTHFD2P13995 350 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 CERS1P27544 350 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SERPINB9P50453 376 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 HSD17B7P56937 341 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SLC13A2Q13183 592 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SETDB1Q15047 1291 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 PFKFB4Q16877 469 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 UBAP2Q5T6F2 1119 aaKnown RBP20.13■□□□□ 0.81
CRNDE-205ENST00000558952 MYLK4Q86YV6 388 aaPredicted RBP20.13■□□□□ 0.81
CRNDE-205ENST00000558952 LGI4Q8N135 537 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 TEX9Q8N6V9 391 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 FAM47BQ8NA70 645 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 ELP5Q8TE02 316 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SLC44A1Q8WWI5 657 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 PSMG3-AS1Q96PY0 264 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SLC5A6Q9Y289 635 aa20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SETXQ7Z333 2677 aaKnown RBP20.13■□□□□ 0.81
CRNDE-205ENST00000558952 SYNDIG1LA6NDD5 238 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 A8MUA0 341 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 E2F3O00716 465 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 KRT38O76015 456 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 TBX6O95947 436 aaPredicted RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 CRYABP02511 175 aaKnown RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 ALDH18A1P54886 795 aaKnown RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 LIM2P55344 173 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 OC90Q02509 493 aaPredicted RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 TUBA3CQ13748 450 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 E2F2Q14209 437 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 NAA30Q147X3 362 aaPredicted RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 ZNF766Q5HY98 468 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 TUBA3EQ6PEY2 450 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 CHSY3Q70JA7 882 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 ZNF595Q8IYB9 648 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 LAS2Q8IYD9 372 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 HORMAD2Q8N7B1 307 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 C5orf34Q96MH7 638 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 PAFAH2Q99487 392 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 SLX1AQ9BQ83 275 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 TBCDQ9BTW9 1192 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 MS4A8Q9BY19 250 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 CDCP1Q9H5V8 836 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 CPSF2Q9P2I0 782 aaKnown RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 ADGRE2Q9UHX3 823 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 DAPP1Q9UN19 280 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 TNPO3Q9Y5L0 923 aaKnown RBP20.12■□□□□ 0.81
CRNDE-205ENST00000558952 SPACA6W5XKT8 324 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 FLNCQ14315 2725 aa20.12■□□□□ 0.81
CRNDE-205ENST00000558952 A0A087WUV0 522 aaPredicted RBP20.11■□□□□ 0.81
CRNDE-205ENST00000558952 GABRR3A8MPY1 467 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 POC1B-GALNT4F8VUJ3 575 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 ECHS1P30084 290 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 PCDH1Q08174 1060 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 TMEM35AQ53FP2 167 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 GRHL2Q6ISB3 625 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 RPS19BP1Q86WX3 136 aaKnown RBP20.11■□□□□ 0.81
CRNDE-205ENST00000558952 SCUBE1Q8IWY4 988 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 KIF2BQ8N4N8 673 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 OR7G3Q8NG95 312 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 DNAJB8Q8NHS0 232 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 ZNF473Q8WTR7 871 aaKnown RBP20.11■□□□□ 0.81
CRNDE-205ENST00000558952 NR4A3Q92570 626 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 CMTM7Q96FZ5 175 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 TAAR6Q96RI8 345 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 CENPKQ9BS16 269 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 ACTR8Q9H981 624 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 PNO1Q9NRX1 252 aaKnown RBP20.11■□□□□ 0.81
CRNDE-205ENST00000558952 ANKRD10Q9NXR5 420 aa20.11■□□□□ 0.81
CRNDE-205ENST00000558952 CDK2AP1O14519 115 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 MYO1DO94832 1006 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 TGFB1P01137 390 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 CD46P15529 392 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 CNTFP26441 200 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 PIK3CGP48736 1102 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 PHEXP78562 749 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 DDX39BQ13838 428 aaKnown RBP20.1■□□□□ 0.81
CRNDE-205ENST00000558952 TERF2Q15554 542 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 OR1C1Q15619 314 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 AP5B1Q2VPB7 878 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 IFT20Q8IY31 132 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 B3GNT7Q8NFL0 401 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 SCYL1Q96KG9 808 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 NPAS2Q99743 824 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 DEFB126Q9BYW3 111 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 LYRM4Q9HD34 91 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 PRDM7Q9NQW5 492 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 ERRFI1Q9UJM3 462 aaPredicted RBP20.1■□□□□ 0.81
CRNDE-205ENST00000558952 OSGIN2Q9Y236 505 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 PCDHGB6Q9Y5F9 930 aa20.1■□□□□ 0.81
CRNDE-205ENST00000558952 ESPL1Q14674 2120 aa20.09■□□□□ 0.81
CRNDE-205ENST00000558952 KLK8O60259 260 aa20.09■□□□□ 0.81
CRNDE-205ENST00000558952 MAN1A2O60476 641 aa20.09■□□□□ 0.81
CRNDE-205ENST00000558952 SH3BGRLO75368 114 aa20.09■□□□□ 0.81
CRNDE-205ENST00000558952 RBP1P09455 135 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms