RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PLA2G16P53816 162 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 DOC2AQ14183 400 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
VPS18-203ENST00000558855 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 TMIGD1Q6UXZ0 262 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 MCEMP1Q8IX19 187 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 LGI4Q8N135 537 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 CCT6BQ92526 530 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 RUNDC3BQ96NL0 473 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 F2RL3Q96RI0 385 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 TRIM45Q9H8W5 580 aaPredicted RBP12.64□□□□□ -0.39
VPS18-203ENST00000558855 PNO1Q9NRX1 252 aaKnown RBP12.64□□□□□ -0.39
VPS18-203ENST00000558855 DEPPQ9NTK1 212 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 WWOXQ9NZC7 414 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 PKDREJQ9NTG1 2253 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 TACC2O95359 2948 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 ASNA1O43681 348 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 CD46P15529 392 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 GNAZP19086 355 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 TRHRP34981 398 aaPredicted RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 HNMTP50135 292 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 MEOX1P50221 254 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 RAB38P57729 211 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 TAS2R50P59544 299 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 GPR85P60893 370 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 POU4F1Q01851 419 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 ART3Q13508 389 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 FAM219BQ5XKK7 198 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 ABHD17CQ6PCB6 329 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 BNC2Q6ZN30 1099 aaPredicted RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 TBC1D19Q8N5T2 526 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 TMEM178AQ8NBL3 297 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 PDPRQ8NCN5 879 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 B3GNT7Q8NFL0 401 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 PYROXD1Q8WU10 500 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 NCLNQ969V3 563 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 UBXN10Q96LJ8 280 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 ERP44Q9BS26 406 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 SORBS1Q9BX66 1292 aaKnown RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 PRDM7Q9NQW5 492 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 PRTFDC1Q9NRG1 225 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 DNAJC11Q9NVH1 559 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 PTBP2Q9UKA9 531 aaKnown RBP12.63□□□□□ -0.39
VPS18-203ENST00000558855 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
VPS18-203ENST00000558855 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
VPS18-203ENST00000558855 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 PSMD12O00232 456 aaPredicted RBP12.62□□□□□ -0.39
VPS18-203ENST00000558855 CLEC3AO75596 197 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 HTR1EP28566 365 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 KIR3DL1P43629 444 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 HLCSP50747 726 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 LIM2P55344 173 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 IRF9Q00978 393 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 ID2Q02363 134 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 KBTBD12Q3ZCT8 623 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 XKR6Q5GH73 641 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 DOLPP1Q86YN1 238 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 GPSM1Q86YR5 675 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 ZNF295-AS1Q8N0V1 137 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 MARVELD2Q8N4S9 558 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 SNX31Q8N9S9 440 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 OR2L5Q8NG80 312 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 FBXO25Q8TCJ0 367 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 WDR34Q96EX3 536 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 MAGED4Q96JG8 741 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 DMRTA2Q96SC8 542 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 MAPKAP1Q9BPZ7 522 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 NT5DC2Q9H857 520 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 WHRNQ9P202 907 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 PPIEQ9UNP9 301 aaKnown RBP12.62□□□□□ -0.39
VPS18-203ENST00000558855 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 MMACHCQ9Y4U1 282 aa12.62□□□□□ -0.39
VPS18-203ENST00000558855 HMX2A2RU54 273 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 UBXN8O00124 270 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 ITGA10O75578 1167 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 ZNF24P17028 368 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 GP5P40197 560 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 CYB561P49447 251 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 STXBP1P61764 594 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms