RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CIB1Q99828 191 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 ABCG4Q9H172 646 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 SMOC1Q9H4F8 434 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 KLHL31Q9H511 634 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 DDX31Q9H8H2 851 aaKnown RBP12.33□□□□□ -0.44
SMAD3-207ENST00000558763 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 TPT1P8Q9HAU6 139 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 SLAMF7Q9NQ25 335 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 PCDHGA4Q9Y5G9 962 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 V9GYQ6 96 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 PI4KAP42356 2102 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 A0A0A6YYD5 115 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ACOX3O15254 700 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CAPN5O15484 640 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TBX19O60806 448 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CREG1O75629 220 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 SCELO95171 688 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 EPN2O95208 641 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 STATHP02808 62 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 MT-ND1P03886 318 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 IL10P22301 178 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CTSKP43235 329 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 KLC1Q07866 573 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 GPR18Q14330 331 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TRIM61Q5EBN2 209 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CCNYL2Q5T2Q4 361 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CPZQ66K79 652 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 IRGCQ6NXR0 463 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 R3HCC1LQ7Z5L2 792 aaKnown RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 FAM47BQ8NA70 645 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 EME1Q96AY2 570 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ZNF597Q96LX8 424 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 SLC6A16Q9GZN6 736 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 DCAF13Q9NV06 445 aaKnown RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 AHSPQ9NZD4 102 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ADAM29Q9UKF5 820 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 UTS2RQ9UKP6 389 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ADAMTS9Q9P2N4 1935 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ARHGAP10A1A4S6 786 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 UPK1AO00322 258 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 DLGAP1O14490 977 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 SOCS2O14508 198 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 PRSS23O95084 383 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 C6orf47O95873 294 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ABCB1P08183 1280 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 DDCP20711 480 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 FASP25445 335 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 HOXD12P35452 270 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 AHRP35869 848 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 MPLP40238 635 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 SNRPNP63162 240 aaKnown RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 VN1R4Q7Z5H5 301 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 NUDT13Q86X67 352 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 NAGSQ8N159 534 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ICA1LQ8NDH6 482 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TTLQ8NG68 377 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 PNPT1Q8TCS8 783 aaKnown RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 LMX1AQ8TE12 382 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 RGMAQ96B86 450 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 PPWD1Q96BP3 646 aaKnown RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 MS4A6EQ96DS6 147 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CENPNQ96H22 339 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 ZNF764Q96H86 408 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 OR2A14Q96R47 310 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 CHID1Q9BWS9 393 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 GSDMCQ9BYG8 508 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 OLAHQ9NV23 265 aa12.32□□□□□ -0.44
SMAD3-207ENST00000558763 TEX10Q9NXF1 929 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-207ENST00000558763 OR2A25A4D2G3 310 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 H0YJX3 145 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 KDM1AO60341 852 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 NUDT7P0C024 238 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 GSTM2P28161 218 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 CMPK1P30085 196 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 RPL3P39023 403 aaKnown RBP12.31□□□□□ -0.44
SMAD3-207ENST00000558763 CRYBA2P53672 197 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 MAPK12P53778 367 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 HNRNPKP61978 463 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD3-207ENST00000558763 FOLH1Q04609 750 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 LRRC74AQ0VAA2 488 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 VMACQ2NL98 169 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 INTS11Q5TA45 600 aaKnown RBP12.31□□□□□ -0.44
SMAD3-207ENST00000558763 PPP4R4Q6NUP7 873 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 GALNT4Q8N4A0 578 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 OR4A15Q8NGL6 344 aa12.31□□□□□ -0.44
SMAD3-207ENST00000558763 SRMSQ9H3Y6 488 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms