RNA–Protein interactions for RNA: ENST00000558489.1

BMP4-203, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 605 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-203ENST00000558489 SERPINI1Q99574 410 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 CLMPQ9H6B4 373 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
BMP4-203ENST00000558489 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 PLLPQ9Y342 182 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 RNF11Q9Y3C5 154 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 HS3ST3B1Q9Y662 390 aa14.34□□□□□ -0.11
BMP4-203ENST00000558489 GOLGA6L10A6NI86 522 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 HPP00738 406 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 TGFB1P01137 390 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 FHP07954 510 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 HNRNPH1P31943 449 aaKnown RBP14.33□□□□□ -0.12
BMP4-203ENST00000558489 SOX8P57073 446 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 LCP2Q13094 533 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 UNC50Q53HI1 259 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 CEP85LQ5SZL2 805 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 FRG2Q64ET8 278 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 OR4C11Q6IEV9 310 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 TMEM205Q6UW68 189 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 LAPTM4BQ86VI4 370 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 OR4F6Q8NGB9 312 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 C9orf43Q8TAL5 461 aaPredicted RBP14.33□□□□□ -0.12
BMP4-203ENST00000558489 TRPC4APQ8TEL6 797 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 FRG2BQ96QU4 278 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 F2RL3Q96RI0 385 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 ZNF382Q96SR6 550 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 SLC25A23Q9BV35 468 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 ZBTB26Q9HCK0 441 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 DMRT3Q9NQL9 472 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 RIC8BQ9NVN3 520 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 OXSMQ9NWU1 459 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 MS4A12Q9NXJ0 267 aa14.33□□□□□ -0.12
BMP4-203ENST00000558489 PCDHGA9Q9Y5G4 932 aaKnown RBP14.33□□□□□ -0.12
BMP4-203ENST00000558489 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
BMP4-203ENST00000558489 SHANK1Q9Y566 2161 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 NSG1A0A0A6YYJ2 146 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ZNF860A6NHJ4 632 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 MAGEB17A8MXT2 336 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 G3V2L1 256 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 K7EM74 188 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 SOCS6O14544 535 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 CTIFO43310 598 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 PRMT3O60678 531 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ALPPP05187 535 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ENO1P06733 434 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 HMOX2P30519 316 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 SSR2P43308 183 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 CDH13P55290 713 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 RAB38P57729 211 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ACTN3Q08043 901 aaPredicted RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 ZNF844Q08AG5 666 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 TRAF3Q13114 568 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 BIKQ13323 160 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 FAM69BQ5VUD6 431 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 LIPMQ5VYY2 423 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 TCTN3Q6NUS6 607 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 KIRREL2Q6UWL6 708 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ATG14Q6ZNE5 492 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 GPRIN3Q6ZVF9 776 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 PAGE2Q7Z2X7 111 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 VN1R5Q7Z5H4 357 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 PTRH1Q86Y79 214 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 CA13Q8N1Q1 262 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 WDR20Q8TBZ3 569 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 NSUN5Q96P11 429 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 QRFPRQ96P65 431 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 ZIM3Q96PE6 472 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 CDK15Q96Q40 435 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 MTERF1Q99551 399 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 TUBB6Q9BUF5 446 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 SLC29A3Q9BZD2 475 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 EPN3Q9H201 632 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 CENPHQ9H3R5 247 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 BRF2Q9HAW0 419 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 LYRM4Q9HD34 91 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 SSU72Q9NP77 194 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 PRDM7Q9NQW5 492 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 EMCNQ9ULC0 261 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 MMACHCQ9Y4U1 282 aa14.32□□□□□ -0.12
BMP4-203ENST00000558489 HEMK1Q9Y5R4 338 aaPredicted RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 UTP20O75691 2785 aaKnown RBP14.32□□□□□ -0.12
BMP4-203ENST00000558489 LOC102723996A0A087X1L8 192 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 A0A1W2PQ72 361 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 FFAR3O14843 346 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 GPR42O15529 346 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 TRIM13O60858 407 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 ULK1O75385 1050 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 HSD3B1P14060 373 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 HIST1H1TP22492 207 aaPredicted RBP14.31□□□□□ -0.12
BMP4-203ENST00000558489 HSD3B2P26439 372 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 TLX1P31314 330 aaPredicted RBP14.31□□□□□ -0.12
BMP4-203ENST00000558489 HSD17B7P56937 341 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 RPS13P62277 151 aaKnown RBP14.31□□□□□ -0.12
BMP4-203ENST00000558489 KCNC4Q03721 635 aa14.31□□□□□ -0.12
BMP4-203ENST00000558489 TLE1Q04724 770 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms