RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 XKR5Q6UX68 686 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ETV3LQ6ZN32 361 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GDPGP1Q6ZNW5 385 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 EIF3MQ7L2H7 374 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RAB11FIP2Q7L804 512 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TMPRSS9Q7Z410 1059 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF438Q7Z4V0 828 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 VN1R5Q7Z5H4 357 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 LDB1Q86U70 411 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GPAT4Q86UL3 456 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SLC22A16Q86VW1 577 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SERPINA9Q86WD7 417 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NPAS4Q8IUM7 802 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZDHHC21Q8IVQ6 265 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TIGD4Q8IY51 512 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OFCC1Q8IZS5 231 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CYP4Z2PQ8N1L4 340 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CADM2Q8N3J6 435 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ARL14Q8N4G2 192 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 LINC00471Q8N535 108 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 BEND7Q8N7W2 519 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 L3MBTL4Q8NA19 623 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CHDHQ8NE62 594 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 DENND6BQ8NEG7 585 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KLHDC9Q8NEP7 349 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR10A6Q8NH74 314 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CLHC1Q8NHS4 586 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SPPL3Q8TCT6 385 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SELENOMQ8WWX9 145 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SNX19Q92543 992 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ELMO1Q92556 727 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 UPF1Q92900 1129 aaKnown RBP eCLIP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 UBE2E3Q969T4 207 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TRIM43Q96BQ3 446 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RHBDF1Q96CC6 855 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 AP2M1Q96CW1 435 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 MOCOSQ96EN8 888 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF419Q96HQ0 510 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZFYVE19Q96K21 471 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CMTM3Q96MX0 182 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FOPNLQ96NB1 174 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF285Q96NJ3 590 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 DACH2Q96NX9 599 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NSUN5Q96P11 429 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PGLYRP2Q96PD5 576 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KCNA7Q96RP8 456 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 LYSMD1Q96S90 227 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 COPS8Q99627 209 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PAAF1Q9BRP4 392 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TBCDQ9BTW9 1192 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FUNDC2Q9BWH2 189 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SLC12A9Q9BXP2 914 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GSDMCQ9BYG8 508 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CIPCQ9C0C6 399 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR51M1Q9H341 326 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 DUSP21Q9H596 190 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ASB8Q9H765 288 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 UNKLQ9H9P5 680 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SARS2Q9NP81 518 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TNFRSF12AQ9NP84 129 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KRT84Q9NSB2 600 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PLCXD1Q9NUJ7 323 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NUDT15Q9NV35 164 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RNF19AQ9NV58 838 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TMEM39AQ9NV64 488 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 DNAJC11Q9NVH1 559 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 THUMPD1Q9NXG2 353 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZDHHC3Q9NYG2 299 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 COA4Q9NYJ1 87 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR6C2Q9NZP2 312 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF282Q9UDV7 671 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SEC14L4Q9UDX3 406 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SRRDQ9UH36 339 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FKBPLQ9UIM3 349 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 BTNL2Q9UIR0 455 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KLHL21Q9UJP4 597 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CDC14AQ9UNH5 594 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 MGAT4BQ9UQ53 548 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF451Q9Y4E5 1061 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KCTD3Q9Y597 815 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PEX16Q9Y5Y5 336 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TRBV5-3A0A0A0MS03 114 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 IRGMA1A4Y4 181 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF840PA6NDX5 716 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 ARRDC5A6NEK1 342 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF729A6NN14 1252 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-207ENST00000558335 MEIS3P2A8K0S8 358 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 AGAP14A8MT82 685 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 UPK1AO00322 258 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 KPNA3O00505 521 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-207ENST00000558335 STK25O00506 426 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 TERTO14746 1132 aaKnown RBP5.29□□□□□ -1.56
GABPB1-207ENST00000558335 SUV39H1O43463 412 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 NOBOXO60393 691 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 EIF1BO60739 113 aaKnown RBP5.29□□□□□ -1.56
GABPB1-207ENST00000558335 FAM20BO75063 409 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF780AO75290 641 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-207ENST00000558335 UPK1BO75841 260 aa5.29□□□□□ -1.56
GABPB1-207ENST00000558335 SLC25A14O95258 325 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms