RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PTGR1Q14914 329 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CDSNQ15517 529 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CALCRLQ16602 461 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 EXOC3L2Q2M3D2 409 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 DCAF4L1Q3SXM0 396 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SLC35D3Q5M8T2 416 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PHYHD1Q5SRE7 291 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 MANEAQ5SRI9 462 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PRAMEF20Q5VT98 475 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 LIPKQ5VXJ0 399 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SEL1L3Q68CR1 1132 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF776Q68DI1 518 aaPredicted RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 RTL6Q6ICC9 239 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 OR7E24Q6IFN5 339 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CWC27Q6UX04 472 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 RAD9BQ6WBX8 426 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF782Q6ZMW2 699 aaPredicted RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 CYP4V2Q6ZWL3 525 aaPredicted RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 CENPUQ71F23 418 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF554Q86TJ5 538 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZDHHC17Q8IUH5 632 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 UBQLNLQ8IYU4 475 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 RCOR2Q8IZ40 523 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 TMEM199Q8N511 208 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 KLHDC1Q8N7A1 406 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 NECAB1Q8N987 351 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 OR52J3Q8NH60 311 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PHLDA1Q8WV24 401 aaPredicted RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 ABTB1Q969K4 478 aaPredicted RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 NT5C3BQ969T7 300 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 RASD2Q96D21 266 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 MRPL53Q96EL3 112 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 HPDLQ96IR7 371 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 RAB40CQ96S21 281 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 RTP3Q9BQQ7 232 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SLC25A33Q9BSK2 321 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 NUSAP1Q9BXS6 441 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 GON7Q9BXV9 100 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 GPR61Q9BZJ8 451 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 VIPAS39Q9H9C1 493 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 FANCEQ9HB96 536 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 APMAPQ9HDC9 416 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 FGF21Q9NSA1 209 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SLC38A7Q9NVC3 462 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 TBC1D13Q9NVG8 400 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 GDAP2Q9NXN4 497 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 BARHL2Q9NY43 387 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PLEK2Q9NYT0 353 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 P2RX2Q9UBL9 471 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 LHX3Q9UBR4 397 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PSME2Q9UL46 239 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SLC7A7Q9UM01 511 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 OR2W1Q9Y3N9 320 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 SLCO1B1Q9Y6L6 691 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CUX2O14529 1486 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PDS5AQ29RF7 1337 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 UMODL1Q5DID0 1318 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SMIM35A0A1B0GVV1 85 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 FAM240BA0A1B0GVZ2 78 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ATP6AP2A0A1C7CYW4 349 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 A0A1W2PN81 502 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 RPS10-NUDT3A0A1W2PQS6 291 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 HELTA6NFD8 242 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 NCF1BA6NI72 391 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 NCF1CA8MVU1 366 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 BECN2A8MW95 431 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PPIAL4DF5H284 164 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CCL24O00175 119 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CASC3O15234 703 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 MID1O15344 667 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SPRY3O43610 288 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CACNG3O60359 315 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ANP32DO95626 131 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 SYF2O95926 243 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 MBD3O95983 291 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 AGTP01019 485 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 UQCRFS1P1P0C7P4 283 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CYP19A1P11511 503 aaPredicted RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 ZNF20P17024 532 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 RBMS1P29558 406 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 SSTR2P30874 369 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TRIM23P36406 574 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CHRNA7P36544 502 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 PGGT1BP53609 377 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 RPL23AP62750 156 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 NCBP1Q09161 790 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 GTF2H2Q13888 395 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 CEACAM7Q14002 265 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 DHX34Q14147 1143 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 SELPLGQ14242 412 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 EXOSC7Q15024 291 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 SSX2Q16385 188 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TDRD12Q587J7 1177 aaKnown RBP3.47□□□□□ -1.85
TDP1-217ENST00000557782 CEP78Q5JTW2 689 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 LYPLAL1Q5VWZ2 237 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 TTC23Q5W5X9 447 aa3.47□□□□□ -1.85
TDP1-217ENST00000557782 ASPHD2Q6ICH7 369 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms