RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ACOT4Q8N9L9 421 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 GAB3Q8WWW8 586 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 RSC1A1Q92681 617 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 SLC38A3Q99624 504 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 RAD21L1Q9H4I0 556 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 GORASP2Q9H8Y8 452 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 TPT1P8Q9HAU6 139 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 CCM2LQ9NUG4 571 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ARMC1Q9NVT9 282 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 TAS2R9Q9NYW1 312 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 C15orf41Q9Y2V0 281 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 A0A0G2JN53 185 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 A0A0J9YVX5 310 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 TCRBV5S2A0A599 114 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 C1orf226A1L170 272 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 PDPK1O15530 556 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ZSCAN9O15535 394 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 C6orf47O95873 294 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 STATHP02808 62 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 PROS1P07225 676 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 NCK1P16333 377 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 HOXB6P17509 224 aaKnown RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 TYRP1P17643 537 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 EFNA1P20827 205 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ZNF10P21506 573 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CAPZBP47756 277 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 LSSP48449 732 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ARRB1P49407 418 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 GZMMP51124 257 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 EPHA4P54764 986 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 SUZ12Q15022 739 aaKnown RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 TRIP10Q15642 601 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CYP51A1Q16850 503 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 MRM1Q6IN84 353 aaKnown RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CATSPER1Q8NEC5 780 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 OR52E4Q8NGH9 312 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 OR8K5Q8NH50 307 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ZFP90Q8TF47 636 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 OR5P2Q8WZ92 322 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 CIDECQ96AQ7 238 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 MACROD1Q9BQ69 325 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 NLNQ9BYT8 704 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 RPF2Q9H7B2 306 aaKnown RBP11.86□□□□□ -0.51
SHMT2-233ENST00000557529 EVA1BQ9NVM1 165 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 USP22Q9UPT9 525 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 ABCA7Q8IZY2 2146 aa11.86□□□□□ -0.51
SHMT2-233ENST00000557529 GON4LQ3T8J9 2241 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 EML5Q05BV3 1969 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 RHPN2P1A8MT19 583 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 C4orf51C9J302 202 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 H0YGG7 62 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 CXCR6O00574 342 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 HNRNPRO43390 633 aaKnown RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 PEX1O43933 1283 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 SDC3O75056 442 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 KRT75O95678 551 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ZNF888P0CJ79 500 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 FCGR1AP12314 374 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 PVRP15151 417 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 CDH3P22223 829 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 RXRGP48443 463 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 RAB8AP61006 207 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ARF3P61204 181 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 HBA1P69905 142 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 BTN3A2P78410 334 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 MPEG1Q2M385 716 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ZC3H12BQ5HYM0 836 aaKnown RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 TBCELQ5QJ74 424 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 NDUFAF5Q5TEU4 345 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 CPZQ66K79 652 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ABHD13Q7L211 337 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 GPR155Q7Z3F1 870 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 C1orf210Q8IVY1 113 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ADGRG5Q8IZF4 528 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 AMER3Q8N944 861 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 KCT2Q8NC54 265 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 UTP15Q8TED0 518 aaKnown RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 DNAJC9Q8WXX5 260 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 FIG4Q92562 907 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 SLCO4A1Q96BD0 722 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ZBED6CLQ96FA7 236 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 PKP2Q99959 881 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 KLHL25Q9H0H3 589 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 SYNPO2LQ9H987 977 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 NEUROD4Q9HD90 331 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 ACSS1Q9NUB1 689 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 DNAAF2Q9NVR5 837 aaKnown RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-233ENST00000557529 PHF11Q9UIL8 331 aa11.85□□□□□ -0.51
SHMT2-233ENST00000557529 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms