RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 OC90Q02509 493 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 ACVR1Q04771 509 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FAM53BQ14153 422 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 EXT1Q16394 746 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 MAPKAPK3Q16644 382 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 MEP1AQ16819 746 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FASTKD1Q53R41 847 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 TSTD2Q5T7W7 516 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 RNF220Q5VTB9 566 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 GARNL3Q5VVW2 1013 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF425Q6IV72 752 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 C11orf63Q6NUN7 778 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 CAVIN1Q6NZI2 390 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 AADACL2Q6P093 401 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PGBD2Q6P3X8 592 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SUSD1Q6UWL2 747 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 CEP128Q6ZU80 1094 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PRSS41Q7RTY9 318 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 ANKRD37Q7Z713 158 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 MTDHQ86UE4 582 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 RPRMLQ8N4K4 120 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FAM98AQ8NCA5 519 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 CHDHQ8NE62 594 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 OR52K1Q8NGK4 314 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 OR9A4Q8NGU2 314 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 LILRB4Q8NHJ6 448 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 GSDMBQ8TAX9 411 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FAM57AQ8TBR7 257 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SMPDL3AQ92484 453 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 JADE3Q92613 823 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 RERGQ96A58 199 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 KIAA1191Q96A73 305 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 C1GALT1C1Q96EU7 318 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 OSBPL8Q9BZF1 889 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 MMP25Q9NPA2 562 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 DLL4Q9NR61 685 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 CCM2LQ9NUG4 571 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SPATA7Q9P0W8 599 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 HCN3Q9P1Z3 774 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 MARCH4Q9P2E8 410 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 TAC3Q9UHF0 121 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PCYOX1Q9UHG3 505 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 TFR2Q9UP52 801 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 RNF6Q9Y252 685 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 EMC9Q9Y3B6 208 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 JMJD1CQ15652 2540 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 A0A1B0GTH9 108 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ARHGEF33A8MVX0 844 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 H3BML4 177 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ADAM11O75078 769 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MFAP3LO75121 409 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ZWINTO95229 277 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MATN4O95460 622 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 TPOP07202 933 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CYC1P08574 325 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 HOXD4P09016 255 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 IL1RNP18510 177 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CHRNB4P30926 498 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 GALNSP34059 522 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CTNNA1P35221 906 aaKnown RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 RPA3P35244 121 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PTGS2P35354 604 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PPARGP37231 505 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 RFC3P40938 356 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 GRIA1P42261 906 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 AVPR1BP47901 424 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PRAMEP78395 509 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PRDX1Q06830 199 aaKnown RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CDH17Q12864 832 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MYBPHQ13203 477 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 TSTA3Q13630 321 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PTK6Q13882 451 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ABRAXAS2Q15018 415 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CEBPEQ15744 281 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 NDUFA9Q16795 377 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 P3H1Q32P28 736 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 SFT2D3Q587I9 215 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 AARS2Q5JTZ9 985 aaKnown RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CTSL3PQ5NE16 218 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PTRHD1Q6GMV3 140 aaKnown RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 SLC25A25Q6KCM7 469 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PAPD4Q6PIY7 484 aaKnown RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 OTOAQ7RTW8 1153 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ADCK2Q7Z695 626 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 LINC00523Q86TU6 105 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PLD3Q8IV08 490 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 CCDC71Q8IV32 467 aaPredicted RBP5.48□□□□□ -1.53
VPS33B-207ENST00000557470 SLC5A8Q8N695 610 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 HORMAD2Q8N7B1 307 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 PCYOX1LQ8NBM8 494 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 KCT2Q8NC54 265 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 OR9A1PQ8NGU1 263 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 OR51Q1Q8NH59 317 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 M1APQ8TC57 530 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 MAGEC3Q8TD91 643 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 UBASH3BQ8TF42 649 aa5.48□□□□□ -1.53
VPS33B-207ENST00000557470 ASB5Q8WWX0 329 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms