RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 HAO2Q9NYQ3 351 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 DDX25Q9UHL0 483 aaKnown RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 PRO0461Q9UI25 63 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 SLC24A2Q9UI40 661 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 MYH2Q9UKX2 1941 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 DICER1Q9UPY3 1922 aaKnown RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 ARFGEF1Q9Y6D6 1849 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 RFX7Q2KHR2 1363 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ABCC12Q96J65 1359 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 LAMB1P07942 1786 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 IGHV3-20A0A0C4DH32 117 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 GLOD5A6NK44 160 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 TRIM77I1YAP6 450 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 TRAFD1O14545 582 aaPredicted RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 PTGESO14684 152 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ECE2O60344 883 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ZNF354AO60765 605 aaPredicted RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 SLCO2B1O94956 709 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 PCCAP05165 728 aaPredicted RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 PCP11498 1178 aaKnown RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 SELEP16581 610 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 AADACP22760 399 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ATP4BP51164 291 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 PRELPP51888 382 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 UBXN2AP68543 259 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CUL4AQ13619 759 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 OPCMLQ14982 345 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 NPTX1Q15818 432 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 PARP10Q53GL7 1025 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CFAP161Q6P656 301 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 SLC24A5Q71RS6 500 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ZBED8Q8IZ13 594 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 NSMAFQ92636 917 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 JAKMIP2Q96AA8 810 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CNOT6LQ96LI5 555 aaKnown RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 KLHL5Q96PQ7 755 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 SLC2A11Q9BYW1 496 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 DNAI2Q9GZS0 605 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 ANKZF1Q9H8Y5 726 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CDH20Q9HBT6 801 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 PDE7BQ9NP56 450 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 OLAHQ9NV23 265 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CWC25Q9NXE8 425 aaPredicted RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 CLIP2Q9UDT6 1046 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 IL17BQ9UHF5 180 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 CPSF3Q9UKF6 684 aaKnown RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 GPR34Q9UPC5 381 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 TMEM5Q9Y2B1 443 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 TNRC6CQ9HCJ0 1690 aaKnown RBP3.16□□□□□ -1.9
VRK1-207ENST00000557352 TTC41PQ6P2S7 1318 aa3.16□□□□□ -1.9
VRK1-207ENST00000557352 BAZ2AQ9UIF9 1905 aaKnown RBP3.15□□□□□ -1.9
VRK1-207ENST00000557352 K7ENM7 598 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 SLC1A7O00341 560 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 CIAO1O76071 339 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 GFPT2O94808 682 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 BAG3O95817 575 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 SAGP10523 405 aaPredicted RBP3.15□□□□□ -1.91
VRK1-207ENST00000557352 MYL6BP14649 208 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 CD22P20273 847 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 EDNRAP25101 427 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 EIF2DP41214 584 aaKnown RBP3.15□□□□□ -1.91
VRK1-207ENST00000557352 CRKLP46109 303 aaKnown RBP3.15□□□□□ -1.91
VRK1-207ENST00000557352 CLDN15P56746 228 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 ITPK1Q13572 414 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 MEA1Q16626 185 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 FAM166AQ6J272 317 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 BAIAP2L2Q6UXY1 529 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 PPP1R42Q7Z4L9 355 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 PCGF5Q86SE9 256 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 DNAAF5Q86Y56 855 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 RCOR2Q8IZ40 523 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 RTL3Q8N8U3 475 aaKnown RBP3.15□□□□□ -1.91
VRK1-207ENST00000557352 CHURC1Q8WUH1 139 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 RFT1Q96AA3 541 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 LRRCC1Q9C099 1032 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 SLITRK2Q9H156 845 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 NOL11Q9H8H0 719 aaKnown RBP3.15□□□□□ -1.91
VRK1-207ENST00000557352 TNFRSF19Q9NS68 423 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 NLGN3Q9NZ94 848 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 B4GALT7Q9UBV7 327 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 VSIG4Q9Y279 399 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 ZNF609O15014 1411 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 FER1L6Q2WGJ9 1857 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 MYH1P12882 1939 aa3.15□□□□□ -1.91
VRK1-207ENST00000557352 MTMR11A4FU01 709 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 GLTPD2A6NH11 291 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 OGTO15294 1046 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 SNX3O60493 162 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 ACSL3O95573 720 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 CSN3P07498 182 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 EPCAMP16422 314 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 PORP16435 677 aaPredicted RBP3.14□□□□□ -1.91
VRK1-207ENST00000557352 KLK2P20151 261 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 KHKP50053 298 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 ASCL1P50553 236 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 NDST2P52849 883 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 ERVK-16P61578 105 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 POLR2LP62875 67 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms