RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CCDC3Q9BQI4 270 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 FAM213AQ9BRX8 229 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 PRSS16Q9NQE7 514 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 OR14J1Q9UGF5 321 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 LIMA1Q9UHB6 759 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 CPSF3Q9UKF6 684 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 CLEC4EQ9ULY5 219 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 NAALADL1Q9UQQ1 740 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 TP53TG5Q9Y2B4 290 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 DLGAP4Q9Y2H0 992 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 ANAPC1Q9H1A4 1944 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 FBN2P35556 2912 aa3.59□□□□□ -1.84
CHD8-212ENST00000557329 NBASA2RRP1 2371 aa3.59□□□□□ -1.84
CHD8-212ENST00000557329 SCN1AP35498 2009 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 SPTBN1Q01082 2364 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 A0A1W2PR77 199 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ANKRD63C9JTQ0 380 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 F5H0A9 414 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 H0YCG3 227 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 VCYO14598 125 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 DVL1O14640 695 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 CREB3O43889 395 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 SEC31AO94979 1220 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TNNC2P02585 160 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 CLEC3BP05452 202 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 GP1BAP07359 652 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PRSS1P07477 247 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 FAM106CPP0CH98 169 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PRLRP16471 622 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PSMA5P28066 241 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 CORO1AP31146 461 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 TUBP50607 506 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 DVL1P1P54792 670 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 MAP3K7CLP57077 242 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TAS2R38P59533 333 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TNNC1P63316 161 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 NOP14P78316 857 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PDE1CQ14123 709 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 CST6Q15828 149 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TMEM215Q68D42 235 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 OR6B2Q6IFH4 312 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 FAM171BQ6P995 826 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PAPD4Q6PIY7 484 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 CLEC18BQ6UXF7 455 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 GFRALQ6UXV0 394 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ASB18Q6ZVZ8 466 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 PTAR1Q7Z6K3 402 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 SATL1Q86VE3 508 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TMEM219Q86XT9 240 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TICAM1Q8IUC6 712 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ARHGAP12Q8IWW6 846 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 SYCP3Q8IZU3 236 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TMEM161BQ8NDZ6 487 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TMEM255BQ8WV15 326 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 RND1Q92730 232 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 FBXO17Q96EF6 278 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 MMABQ96EY8 250 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 HPDLQ96IR7 371 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ANKRD36BP1Q96IX9 119 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 FUCA2Q9BTY2 467 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 RAB34Q9BZG1 259 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ELOVL4Q9GZR5 314 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TKTL2Q9H0I9 626 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 KCNN2Q9H2S1 579 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 DPEP3Q9H4B8 488 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ASB7Q9H672 318 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ERVMER34-1Q9H9K5 563 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ABCB8Q9NUT2 735 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 NLGN3Q9NZ94 848 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 AKAP7Q9P0M2 348 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 ABI3Q9P2A4 366 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 LARSQ9P2J5 1176 aaKnown RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 C2CD2Q9Y426 696 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 ATP8B3O60423 1300 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 MYH10P35580 1976 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 TP53BP1Q12888 1972 aaPredicted RBP3.58□□□□□ -1.84
CHD8-212ENST00000557329 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 SDK2Q58EX2 2172 aa3.58□□□□□ -1.84
CHD8-212ENST00000557329 USP9YO00507 2555 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 BSNQ9UPA5 3926 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 NPIPB15A6NHN6 443 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 PP2D1A8MPX8 630 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 PRAMEF26H0Y7S4 382 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 MKRN2OSH3BPM6 223 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 M0QZ24 198 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 SYNGR3O43761 229 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 TMCC2O75069 709 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 PDE9AO76083 593 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 SVILO95425 2214 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 OLFM2O95897 454 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 RPLP0P05388 317 aaKnown RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 PLA2G4BP0C869 781 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 RALAP11233 206 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 LIFP15018 202 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 PAX1P15863 534 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 GOT1P17174 413 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms