RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 QRFPRQ96P65 431 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 PHF12Q96QT6 1004 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 NAPGQ99747 312 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 EHD1Q9H4M9 534 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 CNOT10Q9H9A5 744 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 SMYD2Q9NRG4 433 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 RNF14Q9UBS8 474 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 FBXW2Q9UKT8 454 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 PPIEQ9UNP9 301 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 E9PLN8 166 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 PRRG2O14669 202 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 CLGNO14967 610 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 ZNHIT1O43257 154 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 PIAS1O75925 651 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 WISP3O95389 354 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-213ENST00000557262 GPR143P51810 404 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 PLA2G16P53816 162 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 HSF1Q00613 529 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 SLC13A2Q13183 592 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 ADPRMQ3LIE5 342 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 GDF7Q7Z4P5 450 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 GPSM1Q86YR5 675 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 CHERPQ8IWX8 916 aaKnown RBP14.82□□□□□ -0.04
TUBB3-213ENST00000557262 ZNF595Q8IYB9 648 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 EID3Q8N140 333 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 SPATA6LQ8N4H0 392 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 OR2L5Q8NG80 312 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 AGAP11Q8TF27 550 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 VMP1Q96GC9 406 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 SERINC2Q96SA4 455 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 KRT12Q99456 494 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 VKORC1Q9BQB6 163 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 REXO4Q9GZR2 422 aaKnown RBP14.82□□□□□ -0.04
TUBB3-213ENST00000557262 DNAJC11Q9NVH1 559 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 WWOXQ9NZC7 414 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 ZNF490Q9ULM2 529 aaPredicted RBP14.82□□□□□ -0.04
TUBB3-213ENST00000557262 MRPS33Q9Y291 106 aaKnown RBP14.82□□□□□ -0.04
TUBB3-213ENST00000557262 ASB1Q9Y576 335 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 CLDN16Q9Y5I7 305 aa14.82□□□□□ -0.04
TUBB3-213ENST00000557262 FBN2P35556 2912 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 SYNDIG1LA6NDD5 238 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 PEX1O43933 1283 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 ITGA10O75578 1167 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 STK16O75716 305 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 ZFAND5O76080 213 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TBX6O95947 436 aaPredicted RBP14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CCDC166P0CW27 439 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 SSTR1P30872 391 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 MEOX1P50221 254 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 SULT1C3Q6IMI6 304 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TRIM40Q6P9F5 258 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CAPN12Q6ZSI9 719 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CYS1Q717R9 158 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CYP4Z2PQ8N1L4 340 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TMEM132CQ8N3T6 1108 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TMEM52Q8NDY8 209 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 C16orf52Q8NHV5 167 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 PHF10Q8WUB8 498 aaKnown RBP14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CDKL2Q92772 493 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 NCLNQ969V3 563 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 ESAMQ96AP7 390 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CCDC77Q9BR77 488 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TMEM79Q9BSE2 394 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CAB39LQ9H9S4 337 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 TXNDC16Q9P2K2 825 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 ZNF223Q9UK11 482 aaPredicted RBP14.81□□□□□ -0.04
TUBB3-213ENST00000557262 YARS2Q9Y2Z4 477 aaKnown RBP14.81□□□□□ -0.04
TUBB3-213ENST00000557262 GTF3C1Q12789 2109 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 PKDREJQ9NTG1 2253 aa14.81□□□□□ -0.04
TUBB3-213ENST00000557262 CXorf49A8MYA2 514 aaPredicted RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 TGFBR3LH3BV60 316 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 CYR61O00622 381 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 TFECO14948 347 aaPredicted RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 EIF3HO15372 352 aaKnown RBP eCLIP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PRAMEF4O60810 478 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 CTNSO60931 367 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 CD1DP15813 335 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 STMN1P16949 149 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PPP2R1BP30154 601 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PTGER1P34995 402 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 HSPA7P48741 367 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 SSR4P51571 173 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 HNRNPFP52597 415 aaKnown RBP14.8□□□□□ -0.04
TUBB3-213ENST00000557262 MTTPP55157 894 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 LIM2P55344 173 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 ATP6V0D1P61421 351 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 TGM3Q08188 693 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 LAPTM5Q13571 262 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 DOC2AQ14183 400 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 RCN2Q14257 317 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.041e-10■■■■■ 39.2
TUBB3-213ENST00000557262 CDSNQ15517 529 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 XKR6Q5GH73 641 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 PRAMEF9Q5VWM5 478 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 MDGA2Q7Z553 956 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 VN1R5Q7Z5H4 357 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 FGD2Q7Z6J4 655 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 SNX31Q8N9S9 440 aa14.8□□□□□ -0.04
TUBB3-213ENST00000557262 FAM47BQ8NA70 645 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms