RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 OR13J1Q8NGT2 312 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF480Q8WV37 535 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 SLC44A1Q8WWI5 657 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 FAM136AQ96C01 138 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 SGCZQ96LD1 299 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 PRMT5O14744 637 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 LRATO95237 230 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 MATN4O95460 622 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 SLC16A8O95907 504 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 PSMA3P25788 255 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 IDUAP35475 653 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 ACVR1BP36896 505 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 HK2P52789 917 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 UBE2HP62256 183 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■■□□ 16.5
PSEN1-220ENST00000557037 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 CAPN13Q6MZZ7 669 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 AFTPHQ6ULP2 937 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 IL17RELQ6ZVW7 336 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF550Q7Z398 422 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 OR4L1Q8NH43 312 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 ANKRD9Q96BM1 317 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 INTS12Q96CB8 462 aaKnown RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 THAP11Q96EK4 314 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 MARK4Q96L34 752 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 FERMT1Q9BQL6 677 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 PRDM14Q9GZV8 571 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 DDX56Q9NY93 547 aaKnown RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 PSD3Q9NYI0 1048 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 BOKQ9UMX3 212 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 PPIEQ9UNP9 301 aaKnown RBP11.46□□□□□ -0.57
PSEN1-220ENST00000557037 SH2B3Q9UQQ2 575 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.57
PSEN1-220ENST00000557037 MED12LQ86YW9 2145 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 A0A0G2JK05 382 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF839A8K0R7 811 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 PSMD12O00232 456 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 AVILO75366 819 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SERPIND1P05546 499 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 H2AFZP0C0S5 128 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SLC35G6P0C7Q6 338 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 ALOX12P18054 663 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SRD5A1P18405 259 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 CTNNA2P26232 953 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 GDF1P27539 372 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 HSD17B2P37059 387 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SLCO1A2P46721 670 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 BMPR2Q13873 1038 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 TERF2Q15554 542 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 P3H1Q32P28 736 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 FASTKD1Q53R41 847 aaKnown RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 DCST1Q5T197 706 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LRRC38Q5VT99 294 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SYDE1Q6ZW31 735 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 H2AFVQ71UI9 128 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 PM20D2Q8IYS1 436 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LRRC25Q8N386 305 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 CTNNBL1Q8WYA6 563 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LRRC45Q96CN5 670 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 NTNG2Q96CW9 530 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LCORQ96JN0 433 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 PANX3Q96QZ0 392 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 SFXN3Q9BWM7 321 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 CALHM2Q9HA72 323 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 MARCH4Q9P2E8 410 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LPAR3Q9UBY5 353 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LCMT1Q9UIC8 334 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 LAMP3Q9UQV4 416 aa11.45□□□□□ -0.58
PSEN1-220ENST00000557037 PRR14LQ5THK1 2151 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 A8MXE2 369 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 KPNA5O15131 536 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 CEP104O60308 925 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 ADAM11O75078 769 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 PLAUP00749 431 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF888P0CJ79 500 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-220ENST00000557037 RNH1P13489 461 aaKnown RBP11.44□□□□□ -0.58
PSEN1-220ENST00000557037 SLC22A10Q63ZE4 541 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 ADGRD1Q6QNK2 874 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 OPN5Q6U736 354 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 HSDL2Q6YN16 418 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 LRRC56Q8IYG6 542 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-220ENST00000557037 GCNT2Q8N0V5 402 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF321PQ8N8H1 164 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 FAM111AQ96PZ2 611 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 HEMGNQ9BXL5 484 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 HSD3B7Q9H2F3 369 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 SLCO5A1Q9H2Y9 848 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 FAM114A2Q9NRY5 505 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 CHMP5Q9NZZ3 219 aa11.44□□□□□ -0.58
PSEN1-220ENST00000557037 BZW2Q9Y6E2 419 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms