RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 DLL4Q9NR61 685 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 PNO1Q9NRX1 252 aaKnown RBP11.05□□□□□ -0.64
ACTN1-221ENST00000556571 HOMER3Q9NSC5 361 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-221ENST00000556571 TRMT1Q9NXH9 659 aaKnown RBP11.05□□□□□ -0.64
ACTN1-221ENST00000556571 TAS2R13Q9NYV9 303 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 ZNF223Q9UK11 482 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-221ENST00000556571 FBXO5Q9UKT4 447 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 RPH3AQ9Y2J0 694 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-221ENST00000556571 FAM215AQ9Y5M1 114 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 JMJD1CQ15652 2540 aa11.05□□□□□ -0.64
ACTN1-221ENST00000556571 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 A0A1B0GTL3 188 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 A0A1B0GVC2 190 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 PINLYPA6NC86 204 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 PABPN1LA6NDY0 278 aaKnown RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 FAM47E-STBD1D6RA91 191 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 PROM1O43490 865 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 OR2J2O76002 312 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GLSO94925 669 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 IGHG3P01860 377 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 SMIM10L1P0DMW3 83 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 CXCR5P32302 372 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 KIR2DL3P43628 341 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 AP1S2P56377 157 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GPS1Q13098 491 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 BBS9Q3SYG4 887 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 CATSPEREQ5SY80 951 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 PAQR3Q6TCH7 311 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 IL20RBQ6UXL0 311 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GK5Q6ZS86 529 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 TRILQ7L0X0 811 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 CA13Q8N1Q1 262 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GPATCH11Q8N954 259 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GOT1L1Q8NHS2 421 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 SLC5A11Q8WWX8 675 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 ATL1Q8WXF7 558 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 ASB15Q8WXK1 588 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 SMIM10Q96HG1 83 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 PDLIM2Q96JY6 352 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 OR4K3Q96R72 315 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 NAP1L3Q99457 506 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 FAM173AQ9BQD7 235 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 GPATCH1Q9BRR8 931 aaKnown RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 TRIM54Q9BYV2 358 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 TTTY12Q9BZ98 90 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
ACTN1-221ENST00000556571 RASSF1Q9NS23 344 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 ARL15Q9NXU5 204 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 Q9UFV3 132 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 ACAD8Q9UKU7 415 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
ACTN1-221ENST00000556571 SYNDIG1LA6NDD5 238 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 CLDN4O14493 209 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 AQP7O14520 342 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 PRKNO60260 465 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-221ENST00000556571 SUSD5O60279 629 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 WDR1O75083 606 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 SERPINA6P08185 405 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 CNR1P21554 472 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 DGKQP52824 942 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 HSD17B7P56937 341 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 TIAL1Q01085 375 aaKnown RBP eCLIP11.03□□□□□ -0.64
ACTN1-221ENST00000556571 TRIP13Q15645 432 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-221ENST00000556571 HSP90AA5PQ58FG0 334 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 XKR6Q5GH73 641 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 ANKRD22Q5VYY1 191 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 RTL6Q6ICC9 239 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-221ENST00000556571 CAMKMTQ7Z624 323 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 LIX1LQ8IVB5 337 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 SCUBE1Q8IWY4 988 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 FAM109AQ8N4B1 249 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 ANKRD53Q8N9V6 530 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 MCUQ8NE86 351 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 NEIL2Q969S2 332 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 FBXL8Q96CD0 374 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 MBD6Q96DN6 1003 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 LINGO1Q96FE5 620 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 FAR2Q96K12 515 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 PBKQ96KB5 322 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 AIF1LQ9BQI0 150 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 SPNS1Q9H2V7 528 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 IL1RL2Q9HB29 575 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 MYOTQ9UBF9 498 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 B4GALT7Q9UBV7 327 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 PLEKHA6Q9Y2H5 1048 aa11.03□□□□□ -0.64
ACTN1-221ENST00000556571 SYT5O00445 386 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 OR6B1O95007 311 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 ADH7P40394 386 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 SOX3P41225 446 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 MAN2A2P49641 1150 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 VPS41P49754 854 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 IL2P60568 153 aa11.02□□□□□ -0.65
ACTN1-221ENST00000556571 ADAM8P78325 824 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms