RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SF3A3Q12874 501 aaKnown RBP eCLIP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 RUNX2Q13950 521 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 SLC9A5Q14940 896 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 KIAA0040Q15053 153 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 SYT16Q17RD7 645 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 GALNTL6Q49A17 601 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 NKAIN1Q4KMZ8 207 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 PRMT9Q6P2P2 845 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 FAM199XQ6PEV8 388 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 C19orf48Q6RUI8 117 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 EPGNQ6UW88 154 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 C6orf15Q6UXA7 325 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 COX15Q7KZN9 410 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 ACOT4Q8N9L9 421 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 TUBGCP3Q96CW5 907 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 MVB12AQ96EY5 273 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 C11orf24Q96F05 449 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 DDX31Q9H8H2 851 aaKnown RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 COPS7BQ9H9Q2 264 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 ZNF304Q9HCX3 659 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 PFDN4Q9NQP4 134 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 RIC8BQ9NVN3 520 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 AHSPQ9NZD4 102 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 HCN3Q9P1Z3 774 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 CDC14AQ9UNH5 594 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 MDC1Q14676 2089 aaKnown RBP16.48■□□□□ 0.23
TUBB3-211ENST00000556536 IGSF10Q6WRI0 2623 aa16.48■□□□□ 0.23
TUBB3-211ENST00000556536 A0A0A6YYD5 115 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 H0YIG0 161 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 TMPRSS11DO60235 418 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 DIAPH2O60879 1101 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 TGDSO95455 350 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 PRR35P0CG20 571 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 IDH3AP50213 366 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 DCDP81605 110 aaKnown RBP16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ABHD18Q0P651 414 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 DSG2Q14126 1118 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 RFTN2Q52LD8 501 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-211ENST00000556536 SPIN4Q56A73 249 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 C6orf136Q5SQH8 315 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ARHGAP40Q5TG30 622 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 NUDT13Q86X67 352 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 MR1Q95460 341 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 MAELQ96JY0 434 aaKnown RBP16.47■□□□□ 0.23
TUBB3-211ENST00000556536 PPP3R2Q96LZ3 170 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 OR52B2Q96RD2 323 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 SERINC2Q96SA4 455 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 EBPLQ9BY08 206 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ROGDIQ9GZN7 287 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 THSD1Q9NS62 852 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 DCTN4Q9UJW0 460 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 ADAM21Q9UKJ8 722 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 POLR3HQ9Y535 204 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-211ENST00000556536 KNTC1P50748 2209 aa16.47■□□□□ 0.23
TUBB3-211ENST00000556536 FLNBO75369 2602 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 A0A088AWK7 358 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 GMNCA6NCL1 334 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 CHST10O43529 356 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 B3GALT2O43825 422 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ONECUT2O95948 504 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 KLK3P07288 261 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ZNF10P21506 573 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 FBLP22087 321 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 TSFMP43897 325 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 RPL38P63173 70 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 SLAMF1Q13291 335 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 COL28A1Q2UY09 1125 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ATP6AP1LQ52LC2 224 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 CCNYL2Q5T2Q4 361 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 NOXRED1Q6NXP6 359 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 GALNT18Q6P9A2 607 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ZNF517Q6ZMY9 492 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 RIPOR1Q6ZS17 1223 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 LARP4Q71RC2 724 aaKnown RBP eCLIP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 PAGE2Q7Z2X7 111 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 CA13Q8N1Q1 262 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 FCRL1Q96LA6 429 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 MAPKAP1Q9BPZ7 522 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 CHST8Q9H2A9 424 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 CCDC86Q9H6F5 360 aaKnown RBP16.46■□□□□ 0.23
TUBB3-211ENST00000556536 KCNK13Q9HB14 408 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 SIRT5Q9NXA8 310 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 ADAM29Q9UKF5 820 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 DLGAP4Q9Y2H0 992 aa16.46■□□□□ 0.23
TUBB3-211ENST00000556536 SPTBP11277 2137 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 STMND1H3BQB6 276 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 PCDH7O60245 1069 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 RAD1O60671 282 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 VPS4BO75351 444 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 AGXTP21549 392 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 DRD4P21917 467 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 TIA1P31483 386 aaKnown RBP eCLIP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 LIM2P55344 173 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 SKP1P63208 163 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms