RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 BTN3A2P78410 334 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 RHAGQ02094 409 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CHAF1BQ13112 559 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 LY6DQ14210 128 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 ZRSR2Q15696 482 aaKnown RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 CPSF6Q16630 551 aaKnown RBP eCLIP9.1□□□□□ -0.95
SRP54-210ENST00000556380 TMEM35AQ53FP2 167 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 DCAF10Q5QP82 559 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 LETMD1Q6P1Q0 360 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 LRIG3Q6UXM1 1119 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 MILR1Q7Z6M3 343 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 SLC22A9Q8IVM8 553 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CA13Q8N1Q1 262 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 TMEM102Q8N9M5 508 aaPredicted RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 MYRIPQ8NFW9 859 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OR4F6Q8NGB9 312 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OR11G2Q8NGC1 345 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 RDH11Q8TC12 318 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 TRPC4APQ8TEL6 797 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CCT6BQ92526 530 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CMTM7Q96FZ5 175 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 APOPT1Q96IL0 206 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OR1F2PQ96R84 312 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 ZNF382Q96SR6 550 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 YIPF2Q9BWQ6 316 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 NPLQ9BXD5 320 aaPredicted RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 ZNF717Q9BY31 904 aaPredicted RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 VN1R1Q9GZP7 353 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 ADNPQ9H2P0 1102 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OR51B5Q9H339 312 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 GSTO2Q9H4Y5 243 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 SEMA4BQ9NPR2 832 aaPredicted RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 DMRT3Q9NQL9 472 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OXSMQ9NWU1 459 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 KCMF1Q9P0J7 381 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 TUBD1Q9UJT1 453 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 A0A0G2JN53 185 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ARGFXA6NJG6 315 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 MAGEB17A8MXT2 336 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 FAM227AF5H4B4 570 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 MASP2O00187 686 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 UBFD1O14562 309 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 PCDH17O14917 1159 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 CTIFO43310 598 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 ALOX12BO75342 701 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 DNAJB5O75953 348 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 SUPT7LO94864 414 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ETHE1O95571 254 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 OTCP00480 354 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 TGFB1P01137 390 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 HEXBP07686 556 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 FHP07954 510 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 FBXO45P0C2W1 286 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 MYL2P10916 166 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 PCNAP12004 261 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 CPA3P15088 417 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ATP5A1P25705 553 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 PTX3P26022 381 aaPredicted RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 HPDP32754 393 aaPredicted RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 ARFIP1P53367 373 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 PLA2G16P53816 162 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 NAGLUP54802 743 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 RPS13P62277 151 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 SKP1P63208 163 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 KCNAB2Q13303 367 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 CUL3Q13618 768 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 KRT71Q3SY84 523 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 C10orf62Q5T681 223 aaPredicted RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 KHDRBS2Q5VWX1 349 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ZNF793Q6ZN11 406 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 C10orf107Q8IVU9 208 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 SRRM1Q8IYB3 904 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 PLPP5Q8NEB5 264 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ATP6V1E2Q96A05 226 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 TBC1D20Q96BZ9 403 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 C8orf44Q96CB5 159 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 REPS1Q96D71 796 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 CCDC126Q96EE4 140 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 PEX11GQ96HA9 241 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 KCNC2Q96PR1 638 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 MTERF1Q99551 399 aaKnown RBP9.09□□□□□ -0.95
SRP54-210ENST00000556380 TBCDQ9BTW9 1192 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 FBXL4Q9UKA2 621 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 CLDN16Q9Y5I7 305 aa9.09□□□□□ -0.95
SRP54-210ENST00000556380 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 IGKV3D-11A0A0A0MRZ8 115 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 K7EM74 188 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 RTCAO00442 366 aaKnown RBP9.08□□□□□ -0.96
SRP54-210ENST00000556380 CYR61O00622 381 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 PEX12O00623 359 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 PLPP1O14494 284 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 SH3BGRLO75368 114 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 SPAG7O75391 227 aa9.08□□□□□ -0.96
SRP54-210ENST00000556380 C1QL1O75973 258 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms