RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SCIMPQ6UWF3 145 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM207Q6UWW9 146 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CXCL17Q6UXB2 119 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 GOLGA7Q7Z5G4 137 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 DEFB128Q7Z7B8 93 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 HORMAD1Q86X24 394 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 KIAA2013Q8IYS2 634 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 RBFAQ8N0V3 343 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TCAIMQ8N3R3 496 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ZCCHC7Q8N3Z6 543 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PGBD5Q8N414 524 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 DPP10Q8N608 796 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 SIDT2Q8NBJ9 832 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 OR13F1Q8NGS4 319 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 OR5K1Q8NHB7 308 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 FBXO30Q8TB52 745 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ARRDC2Q8TBH0 407 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 BPIFB1Q8TDL5 484 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ADAMTS16Q8TE57 1224 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TRUB1Q8WWH5 349 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 STARD8Q92502 1023 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TMBIM1Q969X1 311 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TMIGD2Q96BF3 282 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TADA1Q96BN2 335 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 MRPL38Q96DV4 380 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 FAM120BQ96EK7 910 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 AURKBQ96GD4 344 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF419Q96HQ0 510 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CDKN2AIPNLQ96HQ2 116 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ITCHQ96J02 903 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PLEKHA8Q96JA3 519 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 SPATA17Q96L03 361 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CEP295NLQ96MC4 621 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 NSMCE3Q96MG7 304 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PPM1MQ96MI6 270 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 BBC3Q96PG8 261 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CGREF1Q99674 301 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 APOL4Q9BPW4 351 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PAAF1Q9BRP4 392 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 FEM1AQ9BSK4 669 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 THUMPD3Q9BV44 507 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 APOL5Q9BWW9 433 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 OSBPL10Q9BXB5 764 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 SLC29A3Q9BZD2 475 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TUBB1Q9H4B7 451 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ACTR8Q9H981 624 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 NANOGQ9H9S0 305 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 LIN28AQ9H9Z2 209 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PDFQ9HBH1 243 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PARVBQ9HBI1 364 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 LRTM1Q9HBL6 345 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ATAD3AQ9NVI7 634 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 MIOSQ9NXC5 875 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 UNC79Q9P2D8 2635 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 EVLQ9UI08 416 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 DAPK2Q9UIK4 370 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CRLS1Q9UJA2 301 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ITGB1BP2Q9UKP3 347 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 CDC14AQ9UNH5 594 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 SAMD4AQ9UPU9 718 aaKnown RBP4.25□□□□□ -1.73
ATXN3-241ENST00000556374 PDE10AQ9Y233 779 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TPRKBQ9Y3C4 175 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF711Q9Y462 761 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 OARD1Q9Y530 152 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 INSL6Q9Y581 213 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 TIMM22Q9Y584 194 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 KIAA1671Q9BY89 1806 aa4.25□□□□□ -1.73
ATXN3-241ENST00000556374 C1orf232A0A0U1RR37 186 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 A0A1B0GVM2 712 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 A0A1W2PPW3 197 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ILVBLA1L0T0 632 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 LINC01553A4QN01 128 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SLC38A8A6NNN8 435 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 EVPLLA8MZ36 301 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CLDN25C9JDP6 229 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 H0Y626 953 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 M0R3G1 203 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PLOD2O00469 737 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 CXCR6O00574 342 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 E2F3O00716 465 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 PRMT5O14744 637 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 BCKDKO14874 412 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 LSM1O15116 133 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SLC22A1O15245 554 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 INPPL1O15357 1258 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 FFAR2O15552 330 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 KDELR3O43731 214 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 KLK8O60259 260 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 UGT2B11O75310 529 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 NIPSNAP2O75323 286 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ULK1O75385 1050 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
ATXN3-241ENST00000556374 SEC14L2O76054 403 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 OAZ2O95190 189 aa4.24□□□□□ -1.73
ATXN3-241ENST00000556374 FKBP9O95302 570 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms