RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ABHD17CQ6PCB6 329 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ISLR2Q6UXK2 745 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 GOLGA7Q7Z5G4 137 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ANKRD37Q7Z713 158 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 MYLK4Q86YV6 388 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ZADH2Q8N4Q0 377 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 SRFBP1Q8NEF9 429 aaKnown RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 OR7G3Q8NG95 312 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ACMSDQ8TDX5 336 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ADAMTS18Q8TE60 1221 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PPP4R1Q8TF05 950 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 UBLCP1Q8WVY7 318 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 TSLPQ969D9 159 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 KCNC2Q96PR1 638 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 SERINC2Q96SA4 455 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 WDR77Q9BQA1 342 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ROGDIQ9GZN7 287 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 EPS8L2Q9H6S3 715 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ACTR8Q9H981 624 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 COPS7BQ9H9Q2 264 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PPCSQ9HAB8 311 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ZBTB20Q9HC78 741 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ADGRE2Q9UHX3 823 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 TSC22D4Q9Y3Q8 395 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PCDHGA11Q9Y5H2 935 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 IGKV3D-11A0A0A0MRZ8 115 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 IGHV3-20A0A0C4DH32 117 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 H0YIV9 168 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PYCARD-AS1I3L0S3 204 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PRMT3O60678 531 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 B4GALT2O60909 372 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 WISP1O95388 367 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 CELA2AP08217 269 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 RPS17P08708 135 aaKnown RBP10.84□□□□□ -0.67
SLIRP-205ENST00000556310 SBK3P0C264 359 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 CERS1P27544 350 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PIK3CBP42338 1070 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 MTTPP55157 894 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 RAB38P57729 211 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 MFAP5Q13361 173 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 EXT1Q16394 746 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 TMEM35AQ53FP2 167 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 SFT2D3Q587I9 215 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PAPD4Q6PIY7 484 aaKnown RBP10.84□□□□□ -0.67
SLIRP-205ENST00000556310 Q6ZS92 163 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 L3MBTL4Q8NA19 623 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 Q8NA96 180 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 BRIX1Q8TDN6 353 aaKnown RBP10.84□□□□□ -0.67
SLIRP-205ENST00000556310 MZB1Q8WU39 189 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PSMF1Q92530 271 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 REPS1Q96D71 796 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PHF21BQ96EK2 531 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 CMTM7Q96FZ5 175 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 F2RL3Q96RI0 385 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 LPAR4Q99677 370 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 TBCDQ9BTW9 1192 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 ALG2Q9H553 416 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 IPPKQ9H8X2 491 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 DMRT3Q9NQL9 472 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 PCTPQ9UKL6 214 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 MRPS33Q9Y291 106 aaKnown RBP10.84□□□□□ -0.67
SLIRP-205ENST00000556310 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 MMACHCQ9Y4U1 282 aa10.84□□□□□ -0.67
SLIRP-205ENST00000556310 TCRBV16S1A1N1A0A5B0 115 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 A8MT66 165 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SCELO95171 688 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SLU7O95391 586 aaKnown RBP10.83□□□□□ -0.68
SLIRP-205ENST00000556310 CLDN9O95484 217 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SHBGP04278 402 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 UQCRHP07919 91 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 GSTA1P08263 222 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 ITGAMP11215 1152 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 CCNG1P51959 295 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 MLLT10P55197 1068 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 OR4D2P58180 307 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 VSNL1P62760 191 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 PHEXP78562 749 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TRAF3Q13114 568 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 DDX39BQ13838 428 aaKnown RBP10.83□□□□□ -0.68
SLIRP-205ENST00000556310 RUNX2Q13950 521 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 RCN2Q14257 317 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 RASA2Q15283 850 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 BTBD16Q32M84 506 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 KHDRBS2Q5VWX1 349 aaKnown RBP10.83□□□□□ -0.68
SLIRP-205ENST00000556310 LINC00696Q6ZRV3 163 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 UBE3DQ7Z6J8 389 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TDRPQ86YL5 185 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SCUBE1Q8IWY4 988 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TMEM151AQ8N4L1 468 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SIRT6Q8N6T7 355 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 OR52B6Q8NGF0 335 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 HUS1BQ8NHY5 278 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 MIB2Q96AX9 1013 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 PTCHD1Q96NR3 888 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 LMF1Q96S06 567 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 CENPKQ9BS16 269 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms