RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MFRPQ9BY79 579 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TRIM4Q9C037 500 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 ROGDIQ9GZN7 287 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 EPN3Q9H201 632 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 ZBTB20Q9HC78 741 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-217ENST00000556203 DMRT3Q9NQL9 472 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TSC22D4Q9Y3Q8 395 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 SCN3AQ9NY46 2000 aa14.29□□□□□ -0.12
ACTN1-217ENST00000556203 TLDC2A0PJX2 215 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 PRMT3O60678 531 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 GLRA3O75311 464 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 TSPAN8P19075 237 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 MAOAP21397 527 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 ATP5F1P24539 256 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 ATP5A1P25705 553 aaKnown RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 CD97P48960 835 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 NEK2P51955 445 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 LIM2P55344 173 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 OR4D2P58180 307 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 RPS13P62277 151 aaKnown RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 ACTN3Q08043 901 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 DEPDC1Q5TB30 811 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF793Q6ZN11 406 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 RIPOR1Q6ZS17 1223 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 MILR1Q7Z6M3 343 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 FAM47BQ8NA70 645 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 BRIX1Q8TDN6 353 aaKnown RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 ADAMTS18Q8TE60 1221 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 PPP4R1Q8TF05 950 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 WDR77Q9BQA1 342 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-217ENST00000556203 CENPKQ9BS16 269 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 PRDM9Q9NQV7 894 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 EMCNQ9ULC0 261 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 DAPP1Q9UN19 280 aa14.28□□□□□ -0.12
ACTN1-217ENST00000556203 A0A1B0GTL3 188 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PYCARD-AS1I3L0S3 204 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PPP6CO00743 305 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SUPT7LO94864 414 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 OTCP00480 354 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ICAM2P13598 275 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 HIST1H1TP22492 207 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SSR2P43308 183 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 RAP1GDS1P52306 607 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PRKAA2P54646 552 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 TLE1Q04724 770 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 CLCQ05315 142 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 IFFO1Q0D2I5 559 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 AP5B1Q2VPB7 878 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 BTBD16Q32M84 506 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 UNC50Q53HI1 259 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ZNF678Q5SXM1 525 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PLAG1Q6DJT9 500 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 TTC19Q6DKK2 380 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PAPD4Q6PIY7 484 aaKnown RBP14.27□□□□□ -0.13
ACTN1-217ENST00000556203 IGFL3Q6UXB1 125 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ISLR2Q6UXK2 745 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SLC22A9Q8IVM8 553 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 C4orf33Q8N1A6 199 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ZADH2Q8N4Q0 377 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SIRT6Q8N6T7 355 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ACOT4Q8N9L9 421 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 ARMC2Q8NEN0 867 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 OR4F6Q8NGB9 312 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 TRPC4APQ8TEL6 797 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 CSF3RQ99062 836 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 LPAR4Q99677 370 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SORBS1Q9BX66 1292 aaKnown RBP14.27□□□□□ -0.13
ACTN1-217ENST00000556203 LYRM4Q9HD34 91 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 NECTIN3Q9NQS3 549 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 LUZP4Q9P127 313 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 PTGFRNQ9P2B2 879 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 MMACHCQ9Y4U1 282 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 SPTA1P02549 2419 aa14.27□□□□□ -0.13
ACTN1-217ENST00000556203 IGKV3D-11A0A0A0MRZ8 115 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 J3QKU1 62 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-217ENST00000556203 CYR61O00622 381 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 CLDN4O14493 209 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 SCELO95171 688 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 ETHE1O95571 254 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 UQCRHP07919 91 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 ITGAMP11215 1152 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 KRT4P19013 534 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 IMPDH1P20839 514 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 PTX3P26022 381 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-217ENST00000556203 CRHR1P34998 444 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 CCT5P48643 541 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
ACTN1-217ENST00000556203 AP2B1P63010 937 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 RCN2Q14257 317 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 EXT1Q16394 746 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 GGTA1PQ4G0N0 100 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 CRB2Q5IJ48 1285 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 FRG2Q64ET8 278 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 SLC6A19Q695T7 634 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 OR4C11Q6IEV9 310 aa14.26□□□□□ -0.13
ACTN1-217ENST00000556203 JMJD6Q6NYC1 403 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-217ENST00000556203 LETMD1Q6P1Q0 360 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms