RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 METTL4Q8N3J2 472 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 RNF175Q8N4F7 328 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 METTL27Q8N6F8 245 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 ACOT4Q8N9L9 421 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 ZSCAN1Q8NBB4 408 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 OR51Q1Q8NH59 317 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CT55Q8WUE5 264 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TBC1D20Q96BZ9 403 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MIEF2Q96C03 454 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TUBGCP3Q96CW5 907 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 C19orf60Q96EN9 201 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 OR1F2PQ96R84 312 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 HBEGFQ99075 208 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SORT1Q99523 831 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 FAIM2Q9BWQ8 316 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MRPL1Q9BYD6 325 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 SLC26A1Q9H2B4 701 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 DDX31Q9H8H2 851 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 ZNF395Q9H8N7 513 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 WDR54Q9H977 334 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 LRTM1Q9HBL6 345 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 LYRM4Q9HD34 91 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TNFRSF12AQ9NP84 129 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 PRDM7Q9NQW5 492 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 C1orf109Q9NX04 203 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 LYARQ9NX58 379 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 HCN3Q9P1Z3 774 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 FARSAQ9Y285 508 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 WBP11Q9Y2W2 641 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 TMED5Q9Y3A6 229 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SCN2AQ99250 2005 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CCDC88CQ9P219 2028 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 IGF2RP11717 2491 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CFAP54Q96N23 3096 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 IGLV3-12A0A075B6K2 115 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TEX51A0A1B0GUA7 166 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 GNG14A0A1W2PPG7 69 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 SYNDIG1LA6NDD5 238 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 ZNF860A6NHJ4 632 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 RTCAO00442 366 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 PCDH17O14917 1159 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 KLK10O43240 276 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 MED26O95402 600 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TGDSO95455 350 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 ETHE1O95571 254 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TBX6O95947 436 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 RECKO95980 971 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 IGHEP01854 428 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 KLK1P06870 262 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 VIMP08670 466 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 FAM58BPP0C7Q3 252 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TROVE2P10155 538 aaKnown RBP eCLIP7.22□□□□□ -1.25
TDP1-214ENST00000556063 KITP10721 976 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 DDX5P17844 614 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 CPN2P22792 545 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PRPH2P23942 346 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 CERS1P27544 350 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PTPN4P29074 926 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PPP2R1BP30154 601 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 BSGP35613 385 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 XCR1P46094 333 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 RAB38P57729 211 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TRA2BP62995 288 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 HMGCS1Q01581 520 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 GUCY1A3Q02108 690 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TBL3Q12788 808 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 CLN3Q13286 438 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 SLAMF1Q13291 335 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PDCD2Q16342 344 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 SMU1Q2TAY7 513 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 MFSD4BQ5TF39 518 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 CES4AQ5XG92 561 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 GALNT18Q6P9A2 607 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 FAM199XQ6PEV8 388 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 FAM198BQ6UWH4 519 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 FAM47EQ6ZV65 393 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PRSS41Q7RTY9 318 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 UBE3DQ7Z6J8 389 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 GPR180Q86V85 440 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PDSS2Q86YH6 399 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 LRRC34Q8IZ02 419 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 FAM9CQ8IZT9 166 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 C1orf52Q8N6N3 182 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 AMER3Q8N944 861 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 STT3BQ8TCJ2 826 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 ZCCHC14Q8WYQ9 949 aaKnown RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 RNF31Q96EP0 1072 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 CCNL2Q96S94 520 aaPredicted RBP7.22□□□□□ -1.25
TDP1-214ENST00000556063 SIKE1Q9BRV8 207 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 TGIF2Q9GZN2 237 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 C20orf27Q9GZN8 174 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 AICDAQ9GZX7 198 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 CCDC134Q9H6E4 229 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 PNPOQ9NVS9 261 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 SIRT5Q9NXA8 310 aa7.22□□□□□ -1.25
TDP1-214ENST00000556063 MARCOQ9UEW3 520 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms