RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZGRF1Q86YA3 2104 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 CCDC189A1A4V9 331 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ANKDD1BA6NHY2 528 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 FAM227AF5H4B4 570 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 CLGNO14967 610 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 TAPBPO15533 448 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ERI3O43414 337 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ASNA1O43681 348 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 B3GALT2O43825 422 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 STK16O75716 305 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ZNF24P17028 368 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 SSTR1P30872 391 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 CASP2P42575 452 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 GPR143P51810 404 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 RAB10P61026 200 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 TGM3Q08188 693 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 RUNX2Q13950 521 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 EFTUD2Q15029 972 aaKnown RBP eCLIP11.86□□□□□ -0.516e-7■■■■□ 23
HNRNPC-221ENST00000555883 PDK4Q16654 411 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ZNF630Q2M218 657 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 PAGE2BQ5JRK9 111 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ABHD17CQ6PCB6 329 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 GPALPP1Q8IXQ4 340 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 EID3Q8N140 333 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 SRFBP1Q8NEF9 429 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 VMP1Q96GC9 406 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ROGDIQ9GZN7 287 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 SAYSD1Q9NPB0 183 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ADAP2Q9NPF8 381 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 SCN3AQ9NY46 2000 aa11.86□□□□□ -0.51
HNRNPC-221ENST00000555883 ADGRG4Q8IZF6 3080 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 SVILO95425 2214 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 DIDO1Q9BTC0 2240 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 NCF1BA6NI72 391 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 NCF1CA8MVU1 366 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 CYR61O00622 381 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 MYO1DO94832 1006 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 NCF1P14598 390 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 SERPINB1P30740 379 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 SPRP35270 261 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 KCNC1P48547 511 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 SMSP52788 366 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 MTTPP55157 894 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 NAB1Q13506 487 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 ELAVL1Q15717 326 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 C3AR1Q16581 482 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 MAPKAPK3Q16644 382 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 C18orf21Q32NC0 220 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 GRTP1Q5TC63 336 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 C3orf62Q6ZUJ4 267 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 LRRC70Q7Z2Q7 622 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 VN1R5Q7Z5H4 357 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 C16orf52Q8NHV5 167 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 STAG3L4Q8TBR4 150 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 UBE2E3Q969T4 207 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 KCNC2Q96PR1 638 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 CAB39LQ9H9S4 337 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 LYRM4Q9HD34 91 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 PRTFDC1Q9NRG1 225 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 ZNF490Q9ULM2 529 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 DAPP1Q9UN19 280 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 MEMO1Q9Y316 297 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 FBN2P35556 2912 aa11.85□□□□□ -0.51
HNRNPC-221ENST00000555883 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 NPIPA5E9PKD4 350 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PHGDHO43175 533 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 RAD51CO43502 376 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PRAMEF4O60810 478 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 CTNSO60931 367 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PIAS1O75925 651 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 WISP2O76076 250 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 SCELO95171 688 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 ESRRAP11474 423 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 EPORP19235 508 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 TNFRSF8P28908 595 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 STX2P32856 288 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 HSPA7P48741 367 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PLA2G16P53816 162 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 LIM2P55344 173 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 GPX6P59796 221 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 SLC13A2Q13183 592 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 DOC2AQ14183 400 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 NAA30Q147X3 362 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 OR4D1Q15615 310 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 HIST2H2ACQ16777 129 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 TMEM35AQ53FP2 167 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
HNRNPC-221ENST00000555883 PRAMEF9Q5VWM5 478 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms