RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AGAP7PQ5VUJ5 663 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ADNP2Q6IQ32 1131 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TMEM220Q6QAJ8 160 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 IKBIPQ70UQ0 350 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCDC80Q76M96 950 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ADIPOR2Q86V24 386 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 LACC1Q8IV20 430 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 NRSN1Q8IZ57 195 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 KIAA1958Q8N8K9 716 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 FBXO15Q8NCQ5 510 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 KREMEN2Q8NCW0 462 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 OR4K1Q8NGD4 311 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C9orf43Q8TAL5 461 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF675Q8TD23 568 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 HCAR2Q8TDS4 363 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF689Q96CS4 500 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 LRIG1Q96JA1 1093 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PIP5K1AQ99755 562 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 MAPKAP1Q9BPZ7 522 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C11orf49Q9H6J7 331 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SP140LQ9H930 580 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 MYNNQ9NPC7 610 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 MIEF1Q9NQG6 463 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 DMRT3Q9NQL9 472 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ITM2CQ9NQX7 267 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SPHK2Q9NRA0 654 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TAS2R9Q9NYW1 312 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCDC59Q9P031 241 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 TBC1D14Q9P2M4 693 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 DKK3Q9UBP4 350 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GULP1Q9UBP9 304 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCL26Q9Y258 94 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PNMA8CA0A1B0GUJ8 204 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 AGAP5A6NIR3 686 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C5orf58C9J3I9 102 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCL16O15467 120 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SH3BP5O60239 455 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 UPK1BO75841 260 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GADD45GO95257 159 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C1orf105O95561 183 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 IFNW1P05000 195 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 FURINP09958 794 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C1GALT1C1LP0DN25 315 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CTSAP10619 480 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 DBTP11182 482 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF8P17098 575 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 TNFRSF1BP20333 461 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C21orf33P30042 268 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 MMP12P39900 470 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 EIF2DP41214 584 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 OR1E2P47887 323 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 NUDT6P53370 316 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TAS2R50P59544 299 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.7□□□□□ -1.34
TDP1-213ENST00000555880 ST3GAL4Q11206 333 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PDE7AQ13946 482 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 E2F2Q14209 437 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CRB2Q5IJ48 1285 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 UNC5DQ6UXZ4 953 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 Q6ZPB1 254 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 FAM92BQ6ZTR7 304 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF367Q7RTV3 350 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SLC46A3Q7Z3Q1 461 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TMCO2Q7Z6W1 182 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 SLC22A16Q86VW1 577 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 RNF130Q86XS8 419 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TRAPPC5Q8IUR0 188 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ARMC8Q8IUR7 673 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SLC44A2Q8IWA5 706 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
TDP1-213ENST00000555880 LAS2Q8IYD9 372 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CFAP206Q8IYR0 622 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 OR4C15Q8NGM1 316 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C16orf78Q8WTQ4 265 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF480Q8WV37 535 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 SLC5A11Q8WWX8 675 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GGHQ92820 318 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 FOXJ1Q92949 421 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 WDR34Q96EX3 536 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 YME1L1Q96TA2 773 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 NLNQ9BYT8 704 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZBP1Q9H171 429 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 EPHX3Q9H6B9 360 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CPNE5Q9HCH3 593 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 AMBNQ9NP70 447 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCDC177Q9NQR7 707 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 ABCB10Q9NRK6 738 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 FKBP14Q9NWM8 211 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CLN6Q9NWW5 311 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GPR83Q9NYM4 423 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TBX21Q9UL17 535 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 WDR37Q9Y2I8 494 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 HCN4Q9Y3Q4 1203 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PCDHGA2Q9Y5H1 932 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms