RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 C6orf136Q5SQH8 315 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.47□□□□□ -2.01
SNX6-204ENST00000555541 MARC1Q5VT66 337 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 PAMR1Q6UXH9 720 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 PPP1R21Q6ZMI0 780 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 ABI3BPQ7Z7G0 1075 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 CROCCP3Q8IVE0 287 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 RAD54LQ92698 747 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 RMDN1Q96DB5 314 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 AK8Q96MA6 479 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 RCHY1Q96PM5 261 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 RANBP9Q96S59 729 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 ANKRD2Q9GZV1 360 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 TMX4Q9H1E5 349 aaPredicted RBP2.47□□□□□ -2.01
SNX6-204ENST00000555541 UBQLN3Q9H347 655 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 DPEP2Q9H4A9 486 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 PLEKHA3Q9HB20 300 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 MRGBPQ9NV56 204 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 DHRS4-AS1Q9P1J3 65 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 C5AR2Q9P296 337 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 NIP7Q9Y221 180 aaKnown RBP eCLIP2.47□□□□□ -2.01
SNX6-204ENST00000555541 NCKAP1Q9Y2A7 1128 aa2.47□□□□□ -2.01
SNX6-204ENST00000555541 A8MXE2 369 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 FLRT2O43155 660 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 FRAT2O75474 233 aaPredicted RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 GGPS1O95749 300 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 MOCS2O96007 188 aaPredicted RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 DNTTP04053 509 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 UMPSP11172 480 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 BACE1P56817 501 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 NAAAQ02083 359 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 FASTKQ14296 549 aaKnown RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 COG2Q14746 738 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 LTB4RQ15722 352 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 MAPK11Q15759 364 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 PCK2Q16822 640 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 HYAL4Q2M3T9 481 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 KLHL10Q6JEL2 608 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 ARMCX5Q6P1M9 558 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 IGFL3Q6UXB1 125 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 C11orf57Q6ZUT1 292 aaPredicted RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 NUFIP2Q7Z417 695 aaKnown RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 VASH2Q86V25 355 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 OR6F1Q8NGZ6 308 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 NCOA7Q8NI08 942 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 FLVCR1-AS1Q8TAF5 88 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 LIPHQ8WWY8 451 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 MRPS27Q92552 414 aaKnown RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 NAA11Q9BSU3 229 aaPredicted RBP2.46□□□□□ -2.02
SNX6-204ENST00000555541 POLR3GLQ9BT43 218 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 NACAP1Q9BZK3 213 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 ST6GALNAC4Q9H4F1 302 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 MGAT4AQ9UM21 535 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 SNX7Q9UNH6 387 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 CPQQ9Y646 472 aa2.46□□□□□ -2.02
SNX6-204ENST00000555541 FAM205AQ6ZU69 1335 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 TEX48A0A1B0GUV7 120 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 ZNF732B4DXR9 585 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 H0Y9J4 135 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 SRPX2O60687 465 aaPredicted RBP2.45□□□□□ -2.02
SNX6-204ENST00000555541 FGF19O95750 216 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 KRT3P12035 628 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 PEX3P56589 373 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 RPS27AP62979 156 aaKnown RBP2.45□□□□□ -2.02
SNX6-204ENST00000555541 RBBP4Q09028 425 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 ZNF273Q14593 569 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 SLC22A6Q4U2R8 563 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 RFTN2Q52LD8 501 aaPredicted RBP2.45□□□□□ -2.02
SNX6-204ENST00000555541 KRBOX4Q5JUW0 171 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 ZNF770Q6IQ21 691 aaPredicted RBP2.45□□□□□ -2.02
SNX6-204ENST00000555541 SLC27A4Q6P1M0 643 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 RFWD3Q6PCD5 774 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 TBC1D10CQ8IV04 446 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 NME8Q8N427 588 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 PCNPQ8WW12 178 aaKnown RBP2.45□□□□□ -2.02
SNX6-204ENST00000555541 SMPDL3AQ92484 453 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 ANKRD27Q96NW4 1050 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 TSSK2Q96PF2 358 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 HSD17B14Q9BPX1 270 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 LIME1Q9H400 295 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 NMUR1Q9HB89 426 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 PDFQ9HBH1 243 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 ARMCX1Q9P291 453 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 Q9UF83 564 aa2.45□□□□□ -2.02
SNX6-204ENST00000555541 TRAV9-2A0A087WT02 112 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 FOXI3A8MTJ6 420 aaPredicted RBP2.44□□□□□ -2.02
SNX6-204ENST00000555541 E2F3O00716 465 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PPIP5K2O43314 1243 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 FCGR3BO75015 233 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 TBX10O75333 385 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PGLSO95336 258 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PIGRP01833 764 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 SP9P0CG40 484 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 DLATP10515 647 aaKnown RBP2.44□□□□□ -2.02
SNX6-204ENST00000555541 MGMTP16455 207 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 SLC1A3P43003 542 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 SLC1A6P48664 564 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 TTC31Q49AM3 519 aaPredicted RBP2.44□□□□□ -2.02
SNX6-204ENST00000555541 TCP11X2Q5H9J9 407 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms