RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 SNX15Q9NRS6 342 aa11.55□□□□□ -0.56
CCDC85C-202ENST00000554877 SEC14L3Q9UDX4 400 aa11.55□□□□□ -0.56
CCDC85C-202ENST00000554877 ZNF180Q9UJW8 692 aa11.55□□□□□ -0.56
CCDC85C-202ENST00000554877 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
CCDC85C-202ENST00000554877 NPIPA5E9PKD4 350 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 ZNHIT1O43257 154 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 B3GALT2O43825 422 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 IFNA16P05015 189 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 CYC1P08574 325 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 CD46P15529 392 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 TFEBP19484 476 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 CRABP2P29373 138 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 EEF1DP29692 281 aaKnown RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 HNRNPH1P31943 449 aaKnown RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 ATP6V0D1P61421 351 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 IRF8Q02556 426 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 SLC13A2Q13183 592 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 CHIT1Q13231 466 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 DOC2AQ14183 400 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 HIST2H2ACQ16777 129 aaPredicted RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 MROH9Q5TGP6 573 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 HIST2H2AA3Q6FI13 130 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 ADNP2Q6IQ32 1131 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 NIPAL1Q6NVV3 410 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 PLD6Q8N2A8 252 aaKnown RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 TMEM151AQ8N4L1 468 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 NXNL1Q96CM4 212 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 F2RL3Q96RI0 385 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 SLX1AQ9BQ83 275 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 LIN28AQ9H9Z2 209 aaKnown RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 PRTFDC1Q9NRG1 225 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 LRFN1Q9P244 771 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 COPG2Q9UBF2 871 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 FETUBQ9UGM5 382 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 PTBP2Q9UKA9 531 aaKnown RBP11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 NPIPA1Q9UND3 350 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 ASB1Q9Y576 335 aa11.54□□□□□ -0.56
CCDC85C-202ENST00000554877 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 A0A1B0GUH1 482 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 WIPF3A6NGB9 483 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 UBXN8O00124 270 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 CCL21O00585 134 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 KLK8O60259 260 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 MYO1DO94832 1006 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 SMIM10L1P0DMW3 83 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 PPP2R1BP30154 601 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 MSH2P43246 934 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ALDH6A1Q02252 535 aaKnown RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 PCDH1Q08174 1060 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 PDK4Q16654 411 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 TEX35Q5T0J7 233 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ZNF468Q5VIY5 522 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 SLC25A25Q6KCM7 469 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 H3F3CQ6NXT2 135 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 GALNTL5Q7Z4T8 443 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 MYLK4Q86YV6 388 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 TCAIMQ8N3R3 496 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 TTLQ8NG68 377 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 DNAJB8Q8NHS0 232 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 UBTD2Q8WUN7 234 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 KCTD4Q8WVF5 259 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 GAL3ST3Q96A11 431 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 MS4A6EQ96DS6 147 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 SMIM10Q96HG1 83 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 REXO4Q9GZR2 422 aaKnown RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 RNF32Q9H0A6 362 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ZNF490Q9ULM2 529 aaPredicted RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 ANGPTL3Q9Y5C1 460 aa11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 SPTBN1Q01082 2364 aaKnown RBP11.53□□□□□ -0.56
CCDC85C-202ENST00000554877 A0A088AWK7 358 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ARHGAP10A1A4S6 786 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 LRIT2A6NDA9 550 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SAGE2PA6NJ88 616 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 CLDN4O14493 209 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 KERAO60938 352 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TGFB1P01137 390 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SP1P08047 785 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 LTA4HP09960 611 aaKnown RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SBK3P0C264 359 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ESRRAP11474 423 aaPredicted RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TNNI3P19429 210 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 ZNF10P21506 573 aaPredicted RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 CERS1P27544 350 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 DCTP40126 519 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 SERPINB9P50453 376 aa11.52□□□□□ -0.57
CCDC85C-202ENST00000554877 TDGF1P3P51864 188 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms