RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PLA2G16P53816 162 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 CLDN8P56748 225 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 ISL1P61371 349 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SNRPD1P62314 119 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 TUBA1BP68363 451 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 FOXK1P85037 733 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SP140Q13342 867 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 ELOAQ14241 798 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 NR1D2Q14995 579 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 PTPRRQ15256 657 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 IMPG1Q17R60 797 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 FGD3Q5JSP0 725 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 C10orf62Q5T681 223 aaPredicted RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 CAPN13Q6MZZ7 669 aaPredicted RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 CRTC3Q6UUV7 619 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 USP53Q70EK8 1073 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 TUBA1AQ71U36 451 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 R3HCC1LQ7Z5L2 792 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 SERPINA11Q86U17 422 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 IQCHQ86VS3 1027 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 CPNE9Q8IYJ1 553 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SLC25A45Q8N413 288 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SIDT2Q8NBJ9 832 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 LPCAT1Q8NF37 534 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 GANCQ8TET4 914 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 PHF10Q8WUB8 498 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 RORBQ92753 470 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 ULK4Q96C45 1275 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 FAM120BQ96EK7 910 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 PYURFQ96I23 114 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 PPM1MQ96MI6 270 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 TMEM74Q96NL1 305 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 MROQ9BYG7 248 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 ADNPQ9H2P0 1102 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 ACTL8Q9H568 366 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 KAT8Q9H7Z6 458 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 LIN28AQ9H9Z2 209 aaKnown RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 LRTM1Q9HBL6 345 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 HECAQ9UBI9 543 aaPredicted RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 GIMAP2Q9UG22 337 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 FZD4Q9ULV1 537 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SNX6Q9UNH7 406 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 SRPK3Q9UPE1 567 aa10.67□□□□□ -0.7
SRP54-205ENST00000554803 POLR3HQ9Y535 204 aaPredicted RBP10.67□□□□□ -0.7
SRP54-205ENST00000554803 EDDM13A0A1B0GTR0 161 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 FUOMA2VDF0 154 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 PABPN1LA6NDY0 278 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 SLC1A7O00341 560 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 KPNA5O15131 536 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 UGDHO60701 494 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 NIPSNAP2O75323 286 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 E2F6O75461 281 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 C8GP07360 202 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 ANXA5P08758 320 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 SLC2A4P14672 509 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 CDH3P22223 829 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 PRDX3P30048 256 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 DCTP40126 519 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 AGTR2P50052 363 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 ST13P50502 369 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 METAP1P53582 386 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 MTPNP58546 118 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 CTBSQ01459 385 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 RELAQ04206 551 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 SRSF11Q05519 484 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 FADDQ13158 208 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 OTUD3Q5T2D3 398 aaPredicted RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 C9orf64Q5T6V5 341 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 SYT6Q5T7P8 510 aaPredicted RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 ARMC12Q5T9G4 340 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 HIST2H2BCQ6DN03 193 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 TMEM214Q6NUQ4 689 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 ISLR2Q6UXK2 745 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 TSPYL5Q86VY4 417 aaPredicted RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 ZSWIM9Q86XI8 627 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 PIANPQ8IYJ0 282 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 CENPSQ8N2Z9 138 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 OR7A2PQ8NGA2 310 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 FIG4Q92562 907 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 ZNF641Q96N77 438 aaPredicted RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 MBOAT4Q96T53 435 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 PSD2Q9BQI7 771 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 CPPED1Q9BRF8 314 aaPredicted RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 ASPSCR1Q9BZE9 553 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 GPR63Q9BZJ6 419 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 LHPPQ9H008 270 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 SLC25A18Q9H1K4 315 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 DUSP21Q9H596 190 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 KCTD5Q9NXV2 234 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 WWOXQ9NZC7 414 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 WARS2Q9UGM6 360 aaKnown RBP10.66□□□□□ -0.7
SRP54-205ENST00000554803 ENOPH1Q9UHY7 261 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 FKBPLQ9UIM3 349 aa10.66□□□□□ -0.7
SRP54-205ENST00000554803 LY6G6EA0A0G2JKS1 128 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 A0A0U1RQS6 177 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 A0A1W2PP55 124 aa10.65□□□□□ -0.7
SRP54-205ENST00000554803 NCF1BA6NI72 391 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms