RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 TRIM40Q6P9F5 258 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 EMBQ6PCB8 327 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 LGI4Q8N135 537 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 SLC5A8Q8N695 610 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 SRFBP1Q8NEF9 429 aaKnown RBP8.19□□□□□ -1.1
ACTN1-213ENST00000554508 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 ELP5Q8TE02 316 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 AENQ8WTP8 325 aaKnown RBP8.19□□□□□ -1.1
ACTN1-213ENST00000554508 UBTD2Q8WUN7 234 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 TSLPQ969D9 159 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 ESAMQ96AP7 390 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 NXNL1Q96CM4 212 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 SERINC2Q96SA4 455 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 PAFAH2Q99487 392 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 CCDC77Q9BR77 488 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 ROGDIQ9GZN7 287 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 REXO4Q9GZR2 422 aaKnown RBP8.19□□□□□ -1.1
ACTN1-213ENST00000554508 OPTCQ9UBM4 332 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 ADGRE2Q9UHX3 823 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 RAB21Q9UL25 225 aa8.19□□□□□ -1.1
ACTN1-213ENST00000554508 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
ACTN1-213ENST00000554508 IGKV3D-11A0A0A0MRZ8 115 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 WIPF3A6NGB9 483 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SAGE2PA6NJ88 616 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 C4orf51C9J302 202 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 UBXN8O00124 270 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CLDN4O14493 209 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 PRAMEF4O60810 478 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 PRAMEF2O60811 474 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 ERLIN1O75477 346 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 KLHL2O95198 593 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 RASAL1O95294 804 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 TBX6O95947 436 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CRYABP02511 175 aaKnown RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 EPB42P16452 691 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 TYK2P29597 1187 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SERPINB1P30740 379 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 HNRNPH1P31943 449 aaKnown RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 HSD17B3P37058 310 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SERPINB8P50452 374 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SERPINB9P50453 376 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 MTTPP55157 894 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 HSD17B7P56937 341 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 RAB38P57729 211 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 BTG2P78543 158 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 BMPR2Q13873 1038 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 RUNX2Q13950 521 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 TERF2Q15554 542 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 PRAMEF9Q5VWM5 478 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 METTL2BQ6P1Q9 378 aaKnown RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 MED27Q6P2C8 311 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 KLC3Q6P597 504 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 ABHD17CQ6PCB6 329 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 VN1R5Q7Z5H4 357 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 RPS19BP1Q86WX3 136 aaKnown RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CRLF3Q8IUI8 442 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF595Q8IYB9 648 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 LAS2Q8IYD9 372 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CENPLQ8N0S6 344 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CYP4X1Q8N118 509 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 C7orf57Q8NEG2 295 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 KCTD4Q8WVF5 259 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 EXT2Q93063 718 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 CAVIN3Q969G5 261 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 MAGEB10Q96LZ2 347 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 QRFPRQ96P65 431 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 KCNC2Q96PR1 638 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SLX1AQ9BQ83 275 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 UTP23Q9BRU9 249 aaKnown RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 TBCDQ9BTW9 1192 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 COPS7BQ9H9Q2 264 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-213ENST00000554508 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SNX15Q9NRS6 342 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 OLAHQ9NV23 265 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
ACTN1-213ENST00000554508 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 A0A096LPK6 155 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 A0A0G2JN53 185 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 HMX2A2RU54 273 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 FAM227AF5H4B4 570 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 E2F3O00716 465 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 KLK8O60259 260 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 F10P00742 488 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 SHBGP04278 402 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 MTHFD2P13995 350 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 EPORP19235 508 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 CD22P20273 847 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 MAOAP21397 527 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 CNTFP26441 200 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 GMPRP36959 345 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 PLA2G16P53816 162 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 ALDH18A1P54886 795 aaKnown RBP8.17□□□□□ -1.1
ACTN1-213ENST00000554508 LIM2P55344 173 aa8.17□□□□□ -1.1
ACTN1-213ENST00000554508 IRF9Q00978 393 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms