RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 DDX6P26196 483 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SERPINB1P30740 379 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CCR10P46092 362 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 TUFMP49411 452 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PCYT1AP49585 367 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 DGKEP52429 567 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PLA2G16P53816 162 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 DEFA1P59665 94 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 DEFA3P59666 94 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PITX1P78337 314 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PPP2R2BQ00005 443 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PLP2Q04941 152 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF33BQ06732 778 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FADDQ13158 208 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SEMA3AQ14563 771 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 DMC1Q14565 340 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 INAQ16352 499 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 TAF12Q16514 161 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF181Q2M3W8 571 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 UAP1L1Q3KQV9 507 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PLEKHG6Q3KR16 790 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CDKL4Q5MAI5 379 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 RBM20Q5T481 1227 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 AGBL4Q5VU57 503 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF691Q5VV52 312 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SLX4IPQ5VYV7 408 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 WSCD1Q658N2 575 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CLEC6AQ6EIG7 209 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 XAF1Q6GPH4 301 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ERICH5Q6P6B1 374 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF549Q6P9A3 640 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CYHR1Q6ZMK1 362 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 GPRIN3Q6ZVF9 776 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 BHLHA9Q7RTU4 235 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 KDELC2Q7Z4H8 507 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ADAMTSL2Q86TH1 951 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SPARTQ8N0X7 666 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SLC15A4Q8N697 577 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CLRN3Q8NCR9 226 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 DEFB124Q8NES8 71 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ZMIZ2Q8NF64 920 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 TSTD1Q8NFU3 115 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ABHD11Q8NFV4 315 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 OR2T12Q8NG77 320 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 OR9I1Q8NGQ6 314 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 OR4L1Q8NH43 312 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SPATA22Q8NHS9 363 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 RPLP0P6Q8NHW5 317 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 RORBQ92753 470 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PDLIM5Q96HC4 596 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SH3YL1Q96HL8 342 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FUBP3Q96I24 572 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 REXO5Q96IC2 774 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FBXL20Q96IG2 436 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CELF6Q96J87 481 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 RNF145Q96MT1 663 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PGLYRP2Q96PD5 576 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 P2RY13Q9BPV8 354 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 NEURL2Q9BR09 285 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ASPSCR1Q9BZE9 553 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ADNPQ9H2P0 1102 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 MMP27Q9H306 513 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 MTG2Q9H4K7 406 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 LIN28AQ9H9Z2 209 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 AKIP1Q9NQ31 210 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 GKN1Q9NS71 199 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 POLR3BQ9NW08 1133 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FAM118AQ9NWS6 357 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 NPAP1Q9NZP6 1156 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ANKMY1Q9P2S6 941 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 WARS2Q9UGM6 360 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ENOPH1Q9UHY7 261 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SAMD4AQ9UPU9 718 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 BTRCQ9Y297 605 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PCDHB1Q9Y5F3 818 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CPQQ9Y646 472 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PKD1L2Q7Z442 2459 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SCN8AQ9UQD0 1980 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CEP295Q9C0D2 2601 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 IGLV3-10A0A075B6K4 115 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 ELOVL7A1L3X0 281 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 C2orf78A6NCI8 922 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 C2orf81A6NN90 581 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 H3BMM5 538 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SLC1A7O00341 560 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 LDB2O43679 373 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 BCAS1O75363 584 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 NDUFS3O75489 264 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 BEST1O76090 585 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CNTN5O94779 1100 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PRKD3O94806 890 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SNX4O95219 450 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 VNN2O95498 520 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 SNAP29O95721 258 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 PTTG1O95997 202 aa5.69□□□□□ -1.5
VPS33B-203ENST00000554264 CST1P01037 141 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms