RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 CMTM7Q96FZ5 175 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 APOPT1Q96IL0 206 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 C5orf34Q96MH7 638 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 NTMT1Q9BV86 223 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 ROGDIQ9GZN7 287 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 KLHL31Q9H511 634 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 COPS7BQ9H9Q2 264 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-206ENST00000554170 SEMA4BQ9NPR2 832 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-206ENST00000554170 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 HCN3Q9P1Z3 774 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 HEATR5BQ9P2D3 2071 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 F8P00451 2351 aa12.13□□□□□ -0.47
XRCC3-206ENST00000554170 APCP25054 2843 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 H0YIV9 168 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 OR7A17O14581 309 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 FFAR3O14843 346 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 PCDH17O14917 1159 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 GPR42O15529 346 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ERI3O43414 337 aaKnown RBP12.12□□□□□ -0.47
XRCC3-206ENST00000554170 PLIN3O60664 434 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 PROCP04070 461 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 UMODP07911 640 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 SMIM10L1P0DMW3 83 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CPA3P15088 417 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 PRKAA2P54646 552 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CDH13P55290 713 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 NAA20P61599 178 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 BTN3A2P78410 334 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CLCQ05315 142 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZNF844Q08AG5 666 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 HYAL2Q12891 473 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 DDX39BQ13838 428 aaKnown RBP12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CPSF6Q16630 551 aaKnown RBP eCLIP12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 MFSD4BQ5TF39 518 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZYG11AQ6WRX3 759 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 PDSS2Q86YH6 399 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 IQCKQ8N0W5 287 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 OR2L5Q8NG80 312 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 OR52B6Q8NGF0 335 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZNF473Q8WTR7 871 aaKnown RBP12.12□□□□□ -0.47
XRCC3-206ENST00000554170 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 SMIM10Q96HG1 83 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 NSUN5Q96P11 429 aaKnown RBP12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZIM3Q96PE6 472 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZBTB26Q9HCK0 441 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 MKS1Q9NXB0 559 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 TSC22D4Q9Y3Q8 395 aa12.12□□□□□ -0.47
XRCC3-206ENST00000554170 ZNF860A6NHJ4 632 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 IDSB3KWA1 339 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 CHST10O43529 356 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 BMP10O95393 424 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 MLYCDO95822 493 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 TGFB1P01137 390 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 JAK1P23458 1154 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 PIK3CBP42338 1070 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 XCR1P46094 333 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 PLA2G16P53816 162 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 FOXL2P58012 376 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 ASPHQ12797 758 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 IFT88Q13099 833 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 ATP1A4Q13733 1029 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 ADPRMQ3LIE5 342 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 PLEKHN1Q494U1 663 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 MINDY4Q4G0A6 757 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 TMEM35AQ53FP2 167 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 UNC50Q53HI1 259 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 VWA5B1Q5TIE3 1220 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 C1QL3Q5VWW1 255 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 VN1R5Q7Z5H4 357 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 MRGPREQ86SM8 312 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
XRCC3-206ENST00000554170 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 OR4F6Q8NGB9 312 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 HUS1BQ8NHY5 278 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 METTL21AQ8WXB1 218 aa12.11□□□□□ -0.47
XRCC3-206ENST00000554170 L3HYPDHQ96EM0 354 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms