RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 COX15Q7KZN9 410 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 HPS6Q86YV9 775 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 SLC22A9Q8IVM8 553 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 LILRB2Q8N423 598 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 RIBC1Q8N443 379 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 KCT2Q8NC54 265 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF740Q8NDX6 193 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 OR51Q1Q8NH59 317 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 TM9SF4Q92544 642 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 CCDC126Q96EE4 140 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 PHF21BQ96EK2 531 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 TM9SF2Q99805 663 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 MACROD1Q9BQ69 325 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 TXLNGYQ9BZA5 131 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 SLC22A11Q9NSA0 550 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 HCN3Q9P1Z3 774 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 MID2Q9UJV3 735 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 MRPS33Q9Y291 106 aaKnown RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 STK38LQ9Y2H1 464 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF451Q9Y4E5 1061 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 V9GYY5 206 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 IGLV3-12A0A075B6K2 115 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 NSG1A0A0A6YYJ2 146 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CCDC151A5D8V7 595 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 SYNDIG1LA6NDD5 238 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 A6NL46 340 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 VSTM2BA6NLU5 285 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 IDSB3KWA1 339 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GOLGA8RI6L899 631 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CLDN4O14493 209 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 COPEO14579 308 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ERI3O43414 337 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 FOXS1O43638 330 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 B3GALT2O43825 422 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 UGDHO60701 494 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GALR3O60755 368 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ERLIN1O75477 346 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CLDN9O95484 217 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 UMODP07911 640 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF888P0CJ79 500 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 C8orf89P0DMQ9 161 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 MYBL2P10244 700 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 RNH1P13489 461 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ICAM2P13598 275 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 HSD17B3P37058 310 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CASP2P42575 452 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 KCNC1P48547 511 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 BTN3A2P78410 334 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 MAT1AQ00266 395 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ACTN3Q08043 901 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CHAF1BQ13112 559 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 DDX39BQ13838 428 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 POU4F3Q15319 338 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ERCC6LQ2NKX8 1250 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 AP5B1Q2VPB7 878 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 WIPI1Q5MNZ9 446 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 DCAF10Q5QP82 559 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GRHL2Q6ISB3 625 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ASB18Q6ZVZ8 466 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 TDRPQ86YL5 185 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 PLD6Q8N2A8 252 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 EXD3Q8N9H8 876 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ANKRD53Q8N9V6 530 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 TEX19Q8NA77 164 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 C7orf57Q8NEG2 295 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ADAMTS17Q8TE56 1095 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ADAMTS18Q8TE60 1221 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 WDR34Q96EX3 536 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 CMTM7Q96FZ5 175 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GPR78Q96P69 363 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 REXO4Q9GZR2 422 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 RHBGQ9H310 441 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 IPPKQ9H8X2 491 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF71Q9NQZ8 489 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 RIC8BQ9NVN3 520 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GPR83Q9NYM4 423 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 FBXL4Q9UKA2 621 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 GRID1Q9ULK0 1009 aa7.88□□□□□ -1.15
PSEN1-209ENST00000553855 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
PSEN1-209ENST00000553855 PTPRQQ9UMZ3 2332 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF860A6NHJ4 632 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 LINC01387J3KSC0 135 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 FFAR3O14843 346 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 GPR42O15529 346 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 KLK8O60259 260 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 DPM1O60762 260 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CNOT3O75175 753 aaKnown RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ALOX12BO75342 701 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 SUPT7LO94864 414 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 HTR3BO95264 441 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 BMP10O95393 424 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MED26O95402 600 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms