RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 RUNX2Q13950 521 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.25
FOXN3-204ENST00000553840 TERF2Q15554 542 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 KLC3Q6P597 504 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 ZNF595Q8IYB9 648 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 MRRFQ96E11 262 aaKnown RBP16.59■□□□□ 0.25
FOXN3-204ENST00000553840 DEFB126Q9BYW3 111 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 AICDAQ9GZX7 198 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 NECTIN3Q9NQS3 549 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 ANKRD10Q9NXR5 420 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 SEC14L3Q9UDX4 400 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 ZNF490Q9ULM2 529 aaPredicted RBP16.59■□□□□ 0.25
FOXN3-204ENST00000553840 ANGPTL3Q9Y5C1 460 aa16.59■□□□□ 0.25
FOXN3-204ENST00000553840 A8MUA0 341 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 K7EPI3 171 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 UBXN8O00124 270 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 FCHO1O14526 889 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 STSP08842 583 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 EPB42P16452 691 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 SERPINB1P30740 379 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 CASP2P42575 452 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 MSH2P43246 934 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 KCNC1P48547 511 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 CLCN2P51788 898 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 ACAP2Q15057 778 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 MROH9Q5TGP6 573 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 MED27Q6P2C8 311 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 ABHD17CQ6PCB6 329 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 CHSY3Q70JA7 882 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 MDS2Q8NDY4 140 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 B3GNT7Q8NFL0 401 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 NXNL1Q96CM4 212 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 QRFPRQ96P65 431 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 SIGLEC12Q96PQ1 595 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 KCNC2Q96PR1 638 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 ATOH8Q96SQ7 321 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 NPAS2Q99743 824 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 KLHL1Q9NR64 748 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 PNO1Q9NRX1 252 aaKnown RBP16.58■□□□□ 0.24
FOXN3-204ENST00000553840 IGSF5Q9NSI5 407 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 LRFN1Q9P244 771 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 ADGRE2Q9UHX3 823 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 SPACA6W5XKT8 324 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 POLEQ07864 2286 aa16.58■□□□□ 0.24
FOXN3-204ENST00000553840 PRAMEF4O60810 478 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 MYO1DO94832 1006 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 UNC5CO95185 931 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 C2P06681 752 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 PCNAP12004 261 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 TYK2P29597 1187 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 CYB561P49447 251 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 DLG1Q12959 904 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.57■□□□□ 0.248e-7■■■□□ 14.6
FOXN3-204ENST00000553840 PRAMEF9Q5VWM5 478 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 SPINK14Q6IE38 97 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 VN1R5Q7Z5H4 357 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 KIF2BQ8N4N8 673 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 C7orf57Q8NEG2 295 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 UBTD2Q8WUN7 234 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 KCTD4Q8WVF5 259 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 TMEM125Q96AQ2 219 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 F2RL3Q96RI0 385 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 CCDC77Q9BR77 488 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 TBCDQ9BTW9 1192 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 SNX15Q9NRS6 342 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 DAPP1Q9UN19 280 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 IKBKGQ9Y6K9 419 aa16.57■□□□□ 0.24
FOXN3-204ENST00000553840 SPTAN1Q13813 2472 aaKnown RBP16.57■□□□□ 0.24
FOXN3-204ENST00000553840 MAN1A2O60476 641 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 TUBB4AP04350 444 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 SP1P08047 785 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 GFAPP14136 432 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 CD22P20273 847 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 CERS1P27544 350 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 TPP2P29144 1249 aaPredicted RBP16.56■□□□□ 0.24
FOXN3-204ENST00000553840 GMPRP36959 345 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 SERPINB8P50452 374 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 CASP6P55212 293 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 LIM2P55344 173 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 KCNK10P57789 538 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 MLF1P58340 268 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
FOXN3-204ENST00000553840 BMPR2Q13873 1038 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 E2F2Q14209 437 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 AP5B1Q2VPB7 878 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 TMEM35AQ53FP2 167 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 SLC25A25Q6KCM7 469 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 TAOK1Q7L7X3 1001 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 FJX1Q86VR8 437 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 SCUBE1Q8IWY4 988 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 LAS2Q8IYD9 372 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 TMEM132CQ8N3T6 1108 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 MMGT1Q8N4V1 131 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 FAM47BQ8NA70 645 aa16.56■□□□□ 0.24
FOXN3-204ENST00000553840 NFAM1Q8NET5 270 aaPredicted RBP16.56■□□□□ 0.24
FOXN3-204ENST00000553840 CMTM7Q96FZ5 175 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms