RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GCH1P30793 250 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TNFSF8P32971 234 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CA5AP35218 305 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 KRT20P35900 424 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MMP12P39900 470 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGAP25P42331 645 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PIK3CAP42336 1068 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 RABIFP47224 123 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 FASLGP48023 281 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CCNHP51946 323 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 NDST2P52849 883 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LIMK2P53671 638 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 C21orf59P57076 290 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PROK1P58294 105 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 HNRNPKP61978 463 aaKnown RBP eCLIP2.28□□□□□ -2.042e-13■■■□□ 17.6
CPSF6-207ENST00000551516 RPS21P63220 83 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 FKBP3Q00688 224 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 OGDHQ02218 1023 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GNA12Q03113 381 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SULT2A1Q06520 285 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SLC20A2Q08357 652 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EIF3IQ13347 325 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MSLNQ13421 630 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 C1orf61Q13536 156 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 E2F5Q15329 346 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MYLK3Q32MK0 819 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC14Q49A88 953 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF658BQ4V348 819 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SETMARQ53H47 684 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF805Q5CZA5 627 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CARD16Q5EG05 197 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF789Q5FWF6 425 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EFHC1Q5JVL4 640 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PIK3CD-AS1Q5SR53 167 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ATP1A1-AS1Q5TC04 95 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 HEPHL1Q6MZM0 1159 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 KIAA1161Q6NSJ0 714 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SLC18B1Q6NT16 456 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM65Q6PJ69 517 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM270Q6UE05 265 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GLDNQ6ZMI3 551 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 FAM183BPQ6ZVS7 135 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 STXBP4Q6ZWJ1 553 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ENOSF1Q7L5Y1 443 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SZRD1Q7Z422 152 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 YTHDF3Q7Z739 585 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GALNT5Q7Z7M9 940 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM135Q86UB9 458 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 VASH2Q86V25 355 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ADGRG3Q86Y34 549 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 APLFQ8IW19 511 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 UMODL1-AS1Q8N2C9 162 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PGBD5Q8N414 524 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CARNMT1Q8N4J0 409 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PCDH20Q8N6Y1 951 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ARL10Q8N8L6 244 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GJC3Q8NFK1 279 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MAPK15Q8TD08 544 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 HCAR2Q8TDS4 363 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PATE1Q8WXA2 126 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 INPP5DQ92835 1189 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EME1Q96AY2 570 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TADA1Q96BN2 335 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZG16BQ96DA0 208 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 RTP4Q96DX8 246 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PDXPQ96GD0 296 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC34Q96HJ3 373 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PGAM5Q96HS1 289 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 COX14Q96I36 57 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 HARBI1Q96MB7 349 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF570Q96NI8 536 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SERPINB11Q96P15 392 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 WDFY2Q96P53 400 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GSDMAQ96QA5 445 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SMIM14Q96QK8 99 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GFM1Q96RP9 751 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MCCC1Q96RQ3 725 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PCDHB18PQ96TA0 734 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LGMNQ99538 433 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 OMDQ99983 421 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 QTRT1Q9BXR0 403 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EDEM3Q9BZQ6 932 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 RETREG1Q9H6L5 497 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MVB12BQ9H7P6 319 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SCPEP1Q9HB40 452 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC4Q9HBW1 653 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MAGEE1Q9HCI5 957 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 APMAPQ9HDC9 416 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SPAG4Q9NPE6 437 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 OCIAD1Q9NX40 245 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ANKRD10Q9NXR5 420 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 NDRG3Q9UGV2 375 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 VANGL2Q9ULK5 521 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PCDHGB4Q9UN71 923 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 NCKAP1Q9Y2A7 1128 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SLC17A4Q9Y2C5 497 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LOXL2Q9Y4K0 774 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LSM4Q9Y4Z0 139 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms