RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PHEXP78562 749 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 RCN2Q14257 317 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 INPP5JQ15735 1006 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 TIFABQ6ZNK6 161 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 LCA5Q86VQ0 697 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 REPS1Q96D71 796 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 PHF21BQ96EK2 531 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CMTM7Q96FZ5 175 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CNDP1Q96KN2 507 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CCDC77Q9BR77 488 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CENPKQ9BS16 269 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 IPPKQ9H8X2 491 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 DMRT3Q9NQL9 472 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 MAP10Q9P2G4 905 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 TEKT2Q9UIF3 430 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 PCDHGA11Q9Y5H2 935 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 PCDHGA10Q9Y5H3 936 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CSAG2Q9Y5P2 127 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 FLNBO75369 2602 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 TCRBV16S1A1N1A0A5B0 115 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 FAM227AF5H4B4 570 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 ARL1P40616 181 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 PIK3CBP42338 1070 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 SSR2P43308 183 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 ARG2P78540 354 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 BTG2P78543 158 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 RUNX2Q13950 521 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF169Q14929 603 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 TLR1Q15399 786 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 ABHD17BQ5VST6 288 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 B3GNTL1Q67FW5 361 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 CHSY3Q70JA7 882 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 CUZD1Q86UP6 607 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 FAM47BQ8NA70 645 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 HUS1BQ8NHY5 278 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 M1APQ8TC57 530 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 TBCDQ9BTW9 1192 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 SLC29A3Q9BZD2 475 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 MMP25Q9NPA2 562 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 PCTPQ9UKL6 214 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 USP9XQ93008 2570 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-208ENST00000550102 SETXQ7Z333 2677 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 H0YIV9 168 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 CLDN4O14493 209 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 VPS4BO75351 444 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 RAP1GDS1P52306 607 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 SLC26A5P58743 744 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF33BQ06732 778 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 ESPL1Q14674 2120 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 KHDRBS2Q5VWX1 349 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 SCUBE1Q8IWY4 988 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF595Q8IYB9 648 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 CYP4X1Q8N118 509 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 L3MBTL4Q8NA19 623 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 GALNT11Q8NCW6 608 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 ACMSDQ8TDX5 336 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 UBLCP1Q8WVY7 318 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 MAGEB10Q96LZ2 347 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 MTERF1Q99551 399 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 RNF32Q9H0A6 362 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 PPCSQ9HAB8 311 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 KCNK13Q9HB14 408 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 LYRM4Q9HD34 91 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 DAPP1Q9UN19 280 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 VPS4AQ9UN37 437 aa16.17■□□□□ 0.18
CHMP1A-208ENST00000550102 SYNDIG1LA6NDD5 238 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SAGE2PA6NJ88 616 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 A8MT66 165 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SH3BGRLO75368 114 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SCELO95171 688 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 CLDN9O95484 217 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 TGFB1P01137 390 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 RPS17P08708 135 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 HIST1H1TP22492 207 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 ATP5A1P25705 553 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 TSFMP43897 325 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 CCNG1P51959 295 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 LIM2P55344 173 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 HSD17B7P56937 341 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 TAS2R50P59544 299 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SLC13A2Q13183 592 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 CPSF6Q16630 551 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 AP5B1Q2VPB7 878 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF793Q6ZN11 406 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 UBE3DQ7Z6J8 389 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 SLC5A8Q8N695 610 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 ATP6V1E2Q96A05 226 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 CSF3RQ99062 836 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 OR51B5Q9H339 312 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 NOL11Q9H8H0 719 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 NECTIN3Q9NQS3 549 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 PRTFDC1Q9NRG1 225 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 ABI3Q9P2A4 366 aa16.16■□□□□ 0.18
CHMP1A-208ENST00000550102 TBK1Q9UHD2 729 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms