RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CEP68Q76N32 757 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PRSS48Q7RTY5 328 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 RNF130Q86XS8 419 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 LINC00471Q8N535 108 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PLA2G15Q8NCC3 412 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF540Q8NDQ6 660 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 DENND6BQ8NEG7 585 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 OR10G2Q8NGC3 310 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 NFKBIDQ8NI38 313 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 GAB3Q8WWW8 586 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 NR4A3Q92570 626 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PPP1R14BQ96C90 147 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PDXPQ96GD0 296 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 HRASLS5Q96KN8 279 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 TEFMQ96QE5 360 aaKnown RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 TRMT61BQ9BVS5 477 aaKnown RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 LHPPQ9H008 270 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 DDX31Q9H8H2 851 aaKnown RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 TRIM45Q9H8W5 580 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ANKHQ9HCJ1 492 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PREBQ9HCU5 417 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 NECTIN3Q9NQS3 549 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 PLCXD1Q9NUJ7 323 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 GIMAP4Q9NUV9 329 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 TMEM184CQ9NVA4 438 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 DNAAF2Q9NVR5 837 aaKnown RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 NDUFAF4Q9P032 175 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 MSRAQ9UJ68 235 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 EXO1Q9UQ84 846 aaKnown RBP8.54□□□□□ -1.04
TMEM116-209ENST00000550020 SH2B3Q9UQQ2 575 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 NCKAP1Q9Y2A7 1128 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 HCN4Q9Y3Q4 1203 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ENPP4Q9Y6X5 453 aa8.54□□□□□ -1.04
TMEM116-209ENST00000550020 ZFC3H1O60293 1989 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 OTOL1A6NHN0 477 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 PLPP1O14494 284 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 MID1O15344 667 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 OR1F1O43749 312 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CCNB2O95067 398 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 GADD45GO95257 159 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ATE1O95260 518 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 NUDT7P0C024 238 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 MYOGP15173 224 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 EFNA1P20827 205 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 AQP1P29972 269 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CMPK1P30085 196 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 PKLRP30613 574 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 GDI1P31150 447 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 DRD3P35462 400 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 BSGP35613 385 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 AHRP35869 848 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 GGT2P36268 569 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 XCR1P46094 333 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ALDH9A1P49189 494 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CLK3P49761 638 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 HMGA2P52926 109 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 MVDP53602 400 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 PLA2G16P53816 162 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CDC42P60953 191 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 RPP38P78345 283 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 OLR1P78380 273 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SLC35A2P78381 396 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 MEF2AQ02078 507 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 EEF1A2Q05639 463 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 NFATC3Q12968 1075 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SLC9A5Q14940 896 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SF1Q15637 639 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 NPTX1Q15818 432 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SLC5A12Q1EHB4 618 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 GTF2IRD2BQ6EKJ0 949 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 OR4C11Q6IEV9 310 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ADNP2Q6IQ32 1131 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ANKRD54Q6NXT1 300 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CEACAM20Q6UY09 585 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CHST15Q7LFX5 561 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ADCK2Q7Z695 626 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF605Q86T29 641 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 GTF2IRD2Q86UP8 949 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SAMD14Q8IZD0 417 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 TAGAPQ8N103 731 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 PARP8Q8N3A8 854 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 S100ZQ8WXG8 99 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CIDECQ96AQ7 238 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SLC22A18Q96BI1 424 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 TM4SF18Q96CE8 201 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 C12orf66Q96MD2 445 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 RIPOR3Q96MK2 946 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 CAMK1GQ96NX5 476 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 IL17FQ96PD4 163 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 DCUN1D5Q9BTE7 237 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 SLC6A16Q9GZN6 736 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 ROGDIQ9GZN7 287 aa8.53□□□□□ -1.04
TMEM116-209ENST00000550020 OSGEPL1Q9H4B0 414 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms