RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LCMT2O60294 686 aaKnown RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 MAN1A2O60476 641 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 WISP3O95389 354 aaPredicted RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 LY6G6DO95868 133 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 TPOP07202 933 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ZNF37AP17032 561 aaPredicted RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 IL1RNP18510 177 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SAT1P21673 171 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 RHAGQ02094 409 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SLC25A25Q6KCM7 469 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 LCTLQ6UWM7 567 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 PAMR1Q6UXH9 720 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 C3orf62Q6ZUJ4 267 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ASPGQ86U10 573 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 CDC20BQ86Y33 519 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 PDSS2Q86YH6 399 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ZZZ3Q8IYH5 903 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SHISA5Q8N114 240 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 CPSF7Q8N684 471 aaKnown RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 MFSD9Q8NBP5 474 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ABHD11Q8NFV4 315 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 OR4K1Q8NGD4 311 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ANKRD49Q8WVL7 239 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SLC13A3Q8WWT9 602 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 FBXL8Q96CD0 374 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 VPS39Q96JC1 886 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 C16orf45Q96MC5 204 aaPredicted RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 OR4K3Q96R72 315 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 TP63Q9H3D4 680 aaPredicted RBP11.4□□□□□ -0.58
DDX54-206ENST00000549271 KCNK13Q9HB14 408 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 LANCL2Q9NS86 450 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 NSMCE4AQ9NXX6 385 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 HCN3Q9P1Z3 774 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 A0A1B0GTH9 108 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 TCRBV9S1A1TA0A576 114 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 ATE1O95260 518 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 STATHP02808 62 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 C8BP07358 591 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HIST1H2AGP0C0S8 130 aaPredicted RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 SLC35G6P0C7Q6 338 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 CDH1P12830 882 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HIST1H2ADP20671 130 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 GRK3P35626 688 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 AP1S2P56377 157 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 GUCY2DQ02846 1103 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 CAV1Q03135 178 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 USP10Q14694 798 aaKnown RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 HERC3Q15034 1050 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 PPP1R3AQ16821 1122 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 DEFB113Q30KQ7 82 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 MFSD4BQ5TF39 518 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 NIPAL1Q6NVV3 410 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 PAPD4Q6PIY7 484 aaKnown RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 NKAPQ8N5F7 415 aaKnown RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 SLC5A8Q8N695 610 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HORMAD2Q8N7B1 307 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 KCT2Q8NC54 265 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 MYRIPQ8NFW9 859 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 ANKRD7Q92527 254 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 ALKBH8Q96BT7 664 aaKnown RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 PYCR2Q96C36 320 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HIST1H2AHQ96KK5 128 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 LPAR4Q99677 370 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HIST1H2AJQ99878 128 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 MACROD1Q9BQ69 325 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HAUS8Q9BT25 410 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 H2AFJQ9BTM1 129 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 TRIM54Q9BYV2 358 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
DDX54-206ENST00000549271 ARL15Q9NXU5 204 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 NAALAD2Q9Y3Q0 740 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 HIVEP2P31629 2446 aa11.39□□□□□ -0.59
DDX54-206ENST00000549271 FEZF1A0PJY2 475 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 NPEPPSL1A6NEC2 478 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 OR2W5A6NFC9 320 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 GABRR3A8MPY1 467 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 NME2P1O60361 137 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 RDH16O75452 317 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 URI1O94763 535 aaPredicted RBP11.38□□□□□ -0.59
DDX54-206ENST00000549271 GUCA1CO95843 209 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
DDX54-206ENST00000549271 GSTA2P09210 222 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 NME2P22392 152 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 MAGEA4P43358 317 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 NUP107P57740 925 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 SLC26A5P58743 744 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 SKP1P63208 163 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 POU4F1Q01851 419 aa11.38□□□□□ -0.59
DDX54-206ENST00000549271 MEF2AQ02078 507 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms