RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IMMP1LQ96LU5 166 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 PTCHD1Q96NR3 888 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 TBCDQ9BTW9 1192 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 TUBB6Q9BUF5 446 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 COPS7BQ9H9Q2 264 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 A0A1B0GTL3 188 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 RTCAO00442 366 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 SLC28A2O43868 658 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 PRMT3O60678 531 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 SEC24DO94855 1032 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 SUPT7LO94864 414 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 SERPINA7P05543 415 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 CELA2AP08217 269 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 PRR35P0CG20 571 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 KRT4P19013 534 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 TSPAN8P19075 237 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 IMPDH1P20839 514 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 CRHR1P34998 444 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 CCT5P48643 541 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 PRKAA2P54646 552 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 RAB38P57729 211 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 RPS13P62277 151 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 PHEXP78562 749 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 ZNF678Q5SXM1 525 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 ATG14Q6ZNE5 492 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 QSOX2Q6ZRP7 698 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 MILR1Q7Z6M3 343 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 HPS6Q86YV9 775 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 RIBC1Q8N443 379 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 MREGQ8N565 214 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 OR4F6Q8NGB9 312 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 TRPC4APQ8TEL6 797 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 PPP4R1Q8TF05 950 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 TMEM237Q96Q45 408 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 WDR77Q9BQA1 342 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 ZBTB20Q9HC78 741 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 GRID1Q9ULK0 1009 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 DAPP1Q9UN19 280 aa17.61■□□□□ 0.41
PRPF40B-206ENST00000547764 DPM1O60762 260 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 OTCP00480 354 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 PROCP04070 461 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 PLA2G2AP14555 144 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 MAOAP21397 527 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 ATP5A1P25705 553 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 LIM2P55344 173 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 CLCQ05315 142 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 GGTA1PQ4G0N0 100 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 NADK2Q4G0N4 442 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 SFT2D3Q587I9 215 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 AGAP7PQ5VUJ5 663 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 C4orf33Q8N1A6 199 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 RBMXL3Q8N7X1 1067 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 ACOT4Q8N9L9 421 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 RGMAQ96B86 450 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 MTFMTQ96DP5 389 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 AGAP4Q96P64 663 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 SORBS1Q9BX66 1292 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 ROPN1BQ9BZX4 212 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 ROPN1Q9HAT0 212 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 NECTIN3Q9NQS3 549 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 PRDM9Q9NQV7 894 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 KCMF1Q9P0J7 381 aa17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 FASNP49327 2511 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-206ENST00000547764 IGKV3D-11A0A0A0MRZ8 115 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 G3V2L1 256 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 FOXE1O00358 373 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CYR61O00622 381 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 COPEO14579 308 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 PLIN3O60664 434 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 SCELO95171 688 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ETHE1O95571 254 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ICAM2P13598 275 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 HIST1H1TP22492 207 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CASRP41180 1078 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 SSR2P43308 183 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CD97P48960 835 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 RAP1GDS1P52306 607 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 HNRNPFP52597 415 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 OR4D2P58180 307 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ACTN3Q08043 901 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CCDC153Q494R4 210 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 FRG2Q64ET8 278 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 TTC19Q6DKK2 380 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 OR4C11Q6IEV9 310 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 LETMD1Q6P1Q0 360 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 IGFL3Q6UXB1 125 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ZYG11AQ6WRX3 759 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 RIPOR1Q6ZS17 1223 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 TMEM52Q8NDY8 209 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 BRIX1Q8TDN6 353 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ADAMTS18Q8TE60 1221 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 PSMF1Q92530 271 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 L3HYPDHQ96EM0 354 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms