RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LSMEM1Q8N8F7 131 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 RPF1Q9H9Y2 349 aaKnown RBP2.91□□□□□ -1.94
CCDC38-204ENST00000546816 PLEKHA3Q9HB20 300 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 MRGBPQ9NV56 204 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 C5AR2Q9P296 337 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 DBF4Q9UBU7 674 aaPredicted RBP2.91□□□□□ -1.94
CCDC38-204ENST00000546816 GTF3C4Q9UKN8 822 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 NIP7Q9Y221 180 aaKnown RBP eCLIP2.91□□□□□ -1.94
CCDC38-204ENST00000546816 SLC6A5Q9Y345 797 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 MRPL11Q9Y3B7 192 aaKnown RBP2.91□□□□□ -1.94
CCDC38-204ENST00000546816 FER1L5A0AVI2 2057 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 FAM205AQ6ZU69 1335 aa2.91□□□□□ -1.94
CCDC38-204ENST00000546816 A0A087WV48 116 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 LOC390937A0A1W2PQ73 354 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 FBP2O00757 339 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 PGRMC2O15173 223 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 P4HA2O15460 535 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 PLOD3O60568 738 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 TBX10O75333 385 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 GGPS1O95749 300 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 UMPSP11172 480 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 EEF2P13639 858 aaKnown RBP2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RPL9P32969 192 aaKnown RBP2.9□□□□□ -1.95
CCDC38-204ENST00000546816 OR3A3P47888 321 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RPL34P49207 117 aaKnown RBP2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RAD23AP54725 363 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 BACE1P56817 501 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 TNK1Q13470 666 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RASA2Q15283 850 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 UGCGQ16739 394 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 HYAL4Q2M3T9 481 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 LRRC73Q5JTD7 316 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 C6orf136Q5SQH8 315 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 CROCCP3Q8IVE0 287 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 ZNRF1Q8ND25 227 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 OR6J1Q8NGC5 347 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RAD54LQ92698 747 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 FAM129AQ9BZQ8 928 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 CUTCQ9NTM9 273 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 RUVBL2Q9Y230 463 aaKnown RBP2.9□□□□□ -1.95
CCDC38-204ENST00000546816 NCKAP1Q9Y2A7 1128 aa2.9□□□□□ -1.95
CCDC38-204ENST00000546816 TEX48A0A1B0GUV7 120 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF732B4DXR9 585 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 SUPT20HL2P0C7V6 817 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 BDNFP23560 247 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 SPRP35270 261 aaPredicted RBP2.89□□□□□ -1.95
CCDC38-204ENST00000546816 CNTN1Q12860 1018 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 PCK2Q16822 640 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 ECSCRQ19T08 205 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 VWA2Q5GFL6 755 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 MARC1Q5VT66 337 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 KLHL10Q6JEL2 608 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 RPUSD3Q6P087 351 aaKnown RBP2.89□□□□□ -1.95
CCDC38-204ENST00000546816 RFWD3Q6PCD5 774 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 TMEM64Q6YI46 380 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 PPP1R21Q6ZMI0 780 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 C11orf57Q6ZUT1 292 aaPredicted RBP2.89□□□□□ -1.95
CCDC38-204ENST00000546816 ABI3BPQ7Z7G0 1075 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 PHLDB2Q86SQ0 1253 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 GRK7Q8WTQ7 553 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 NAA11Q9BSU3 229 aaPredicted RBP2.89□□□□□ -1.95
CCDC38-204ENST00000546816 UBQLN3Q9H347 655 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 DPEP2Q9H4A9 486 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 SNX7Q9UNH6 387 aa2.89□□□□□ -1.95
CCDC38-204ENST00000546816 E2F3O00716 465 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 IGHG3P01860 377 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 DLATP10515 647 aaKnown RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 KRT3P12035 628 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 ATP6V1B1P15313 513 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 PSMB4P28070 264 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 NAGLUP54802 743 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 RPS27AP62979 156 aaKnown RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 NAAAQ02083 359 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF273Q14593 569 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 MAPK11Q15759 364 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 TWISTNBQ3B726 338 aaPredicted RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 SLC22A6Q4U2R8 563 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 ZNF770Q6IQ21 691 aaPredicted RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 ADCK2Q7Z695 626 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 TIGD4Q8IY51 512 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 NCOA7Q8NI08 942 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 OCC1Q8TAD7 63 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 PCNPQ8WW12 178 aaKnown RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 LIPHQ8WWY8 451 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 SMPDL3AQ92484 453 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 MRPS27Q92552 414 aaKnown RBP2.88□□□□□ -1.95
CCDC38-204ENST00000546816 NUS1Q96E22 293 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 HSD17B14Q9BPX1 270 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 PDFQ9HBH1 243 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 RAB9BQ9NP90 201 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 PFDN4Q9NQP4 134 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 IL17CQ9P0M4 197 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 ARMCX1Q9P291 453 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 CPQQ9Y646 472 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 KAT6BQ8WYB5 2073 aa2.88□□□□□ -1.95
CCDC38-204ENST00000546816 TRAV9-2A0A087WT02 112 aa2.87□□□□□ -1.95
CCDC38-204ENST00000546816 TSPY2A6NKD2 308 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms