RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HBEGFQ99075 208 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 PAIP2Q9BPZ3 127 aaKnown RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 NPLQ9BXD5 320 aaPredicted RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF717Q9BY31 904 aaPredicted RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ROGDIQ9GZN7 287 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ACBD3Q9H3P7 528 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 PRORYQ9H606 182 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 COPS7BQ9H9Q2 264 aaPredicted RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 EML4Q9HC35 981 aaKnown RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 B3GALT2O43825 422 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 SEMA3DO95025 777 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 SERPINE1P05121 402 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 PRKAR1AP10644 381 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 UROSP10746 265 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 HSD3B1P14060 373 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 HIST1H1TP22492 207 aaPredicted RBP19.34■□□□□ 0.69
HMGA2-211ENST00000545998 ATP5A1P25705 553 aaKnown RBP19.34■□□□□ 0.69
HMGA2-211ENST00000545998 HSD3B2P26439 372 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 CERS1P27544 350 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 TSFMP43897 325 aaKnown RBP19.34■□□□□ 0.69
HMGA2-211ENST00000545998 RAP1GDS1P52306 607 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF33BQ06732 778 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 CDC20Q12834 499 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 RUNX2Q13950 521 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 SSPNQ14714 243 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 ABRAXAS2Q15018 415 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 AP5B1Q2VPB7 878 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 OR4C11Q6IEV9 310 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 PRSS58Q8IYP2 241 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 ACOT4Q8N9L9 421 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 PPP1R14CQ8TAE6 165 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 PEX11GQ96HA9 241 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 OR1F2PQ96R84 312 aa19.34■□□□□ 0.69
HMGA2-211ENST00000545998 SORBS1Q9BX66 1292 aaKnown RBP19.34■□□□□ 0.69
HMGA2-211ENST00000545998 SERTM1A2A2V5 107 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 JRKO75564 520 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 CRCPO75575 148 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 IL10P22301 178 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 SSR2P43308 183 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 CSTF3Q12996 717 aaKnown RBP19.33■□□□□ 0.69
HMGA2-211ENST00000545998 COL28A1Q2UY09 1125 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 CLEC6AQ6EIG7 209 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 SLC12A4Q9UP95 1085 aa19.33■□□□□ 0.69
HMGA2-211ENST00000545998 CDC14CA4D256 554 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 AZIN1O14977 448 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 FGF4P08620 206 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 RNH1P13489 461 aaKnown RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 BGNP21810 368 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 SERPINB3P29508 390 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 BSGP35613 385 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 EFNA3P52797 238 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 MED25Q71SY5 747 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 GBP7Q8N8V2 638 aaPredicted RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 TBC1D20Q96BZ9 403 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 CRB3Q9BUF7 120 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 MRPL1Q9BYD6 325 aaKnown RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 ACPTQ9BZG2 426 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 LANCL2Q9NS86 450 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 SEMA3GQ9NS98 782 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 C3orf18Q9UK00 162 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 PCSK5Q92824 1860 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 IDSB3KWA1 339 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 TMEM114B3SHH9 223 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 ITM2AO43736 263 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 FHP07954 510 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 GRK2P25098 689 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 OTX2P32243 289 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 LIM2P55344 173 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 ABCE1P61221 599 aaKnown RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 KANK2Q63ZY3 851 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 SCIMPQ6UWF3 145 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 ZCCHC7Q8N3Z6 543 aaKnown RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 RBCK1Q9BYM8 510 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 VN1R1Q9GZP7 353 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 DDX31Q9H8H2 851 aaKnown RBP19.32■□□□□ 0.68
HMGA2-211ENST00000545998 LYRM4Q9HD34 91 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 NMRK1Q9NWW6 199 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 KCMF1Q9P0J7 381 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 VPS29Q9UBQ0 182 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 MKL2Q9ULH7 1088 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 DAPP1Q9UN19 280 aa19.32■□□□□ 0.68
HMGA2-211ENST00000545998 MED13Q9UHV7 2174 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 EEDO75530 441 aaKnown RBP19.31■□□□□ 0.68
HMGA2-211ENST00000545998 LYPLA1O75608 230 aaPredicted RBP19.31■□□□□ 0.68
HMGA2-211ENST00000545998 HEXBP07686 556 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 NEFHP12036 1026 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 CHN1P15882 459 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 MMP11P24347 488 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 EMP2P54851 167 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 RAB38P57729 211 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 TBL3Q12788 808 aaKnown RBP19.31■□□□□ 0.68
HMGA2-211ENST00000545998 SH2D4BQ5SQS7 431 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 TRIM46Q7Z4K8 759 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 PPP1R32Q7Z5V6 425 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 RAB43Q86YS6 212 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 METTL4Q8N3J2 472 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 NACC2Q96BF6 587 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 C20orf27Q9GZN8 174 aa19.31■□□□□ 0.68
HMGA2-211ENST00000545998 ZNF395Q9H8N7 513 aaPredicted RBP19.31■□□□□ 0.68
HMGA2-211ENST00000545998 ZDHHC2Q9UIJ5 367 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms