RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OBSL1O75147 1896 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 K7ESM1 405 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 CTDSP2O14595 271 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 SSX4O60224 188 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 RECKO95980 971 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 EEF1A2Q05639 463 aaKnown RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 LY6G5CQ5SRR4 150 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 DESI1Q6ICB0 168 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 DDX53Q86TM3 631 aaKnown RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 SLC35B4Q969S0 331 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 IL17FQ96PD4 163 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 PIP5K1AQ99755 562 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 RSPO3Q9BXY4 272 aaPredicted RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 DMRT3Q9NQL9 472 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 PIPSLA2A3N6 862 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 ZNF197O14709 1029 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 ZW10O43264 779 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 KIAA0513O60268 411 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 GPR37L1O60883 481 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 IL3P08700 152 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 S100A5P33763 92 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 CNR2P34972 360 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 HOXD12P35452 270 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 XCR1P46094 333 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 PXNP49023 591 aaPredicted RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 PRLHRP49683 370 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 KLHL17Q6TDP4 642 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 TECPR1Q7Z6L1 1165 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 DENND6BQ8NEG7 585 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 GOT1L1Q8NHS2 421 aaPredicted RBP15.11■□□□□ 0.01
LDLR-204ENST00000545707 SLC6A16Q9GZN6 736 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 EHD1Q9H4M9 534 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 C11orf16Q9NQ32 467 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 C14orf119Q9NWQ9 140 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 TAS2R9Q9NYW1 312 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 PLAGL1Q9UM63 463 aa15.11■□□□□ 0.01
LDLR-204ENST00000545707 A0A1W2PRB8 838 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 SNPHO15079 494 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 SOX14O95416 240 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 GSTT2P0CG29 244 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 GSTT2BP0CG30 244 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 CKMT1AP12532 417 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 CHMP24386 653 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 PUM1Q14671 1186 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDLR-204ENST00000545707 ATAD3BQ5T9A4 648 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 PTCHD4Q6ZW05 846 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 WDR53Q7Z5U6 358 aaPredicted RBP15.1■□□□□ 0.01
LDLR-204ENST00000545707 LACC1Q8IV20 430 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 DEPDC4Q8N2C3 294 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 IRF7Q92985 503 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 MGLLQ99685 303 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 OR2AG1Q9H205 316 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 HCN4Q9Y3Q4 1203 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 COL4A6Q14031 1691 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 PCM1Q15154 2024 aa15.1■□□□□ 0.01
LDLR-204ENST00000545707 TAF4O00268 1085 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 RTCAO00442 366 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 FFAR1O14842 300 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 CCNB2O95067 398 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ELFN1P0C7U0 828 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 C1GALT1C1LP0DN25 315 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 RCVRNP35243 200 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 DCDC1P59894 354 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 LRRC74AQ0VAA2 488 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 UAP1L1Q3KQV9 507 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 FAM71E1Q6IPT2 247 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 TMEM53Q6P2H8 277 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 TNFAIP8L2Q6P589 184 aaPredicted RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 TRIM40Q6P9F5 258 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 LIPIQ6XZB0 460 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 BCDIN3DQ7Z5W3 292 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 TRAPPC5Q8IUR0 188 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 Q8N9G6 341 aaPredicted RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 METTL2AQ96IZ6 378 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 DEFB118Q96PH6 123 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 VPS35Q96QK1 796 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 RAD9AQ99638 391 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ABCG4Q9H172 646 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 SP140LQ9H930 580 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 NMNAT1Q9HAN9 279 aaPredicted RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 C5AR2Q9P296 337 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ATP11BQ9Y2G3 1177 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 PRKAB1Q9Y478 270 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 TRBV4-1A0A0J9YWV2 114 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 WASH3PC4AMC7 463 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 PLK4O00444 970 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 LILRB3O75022 631 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
LDLR-204ENST00000545707 UGT2B15P54855 530 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 LIM2P55344 173 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 TLE2Q04725 743 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 FCHO2Q0JRZ9 810 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 CDC20Q12834 499 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 IRF3Q14653 427 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 ZNF181Q2M3W8 571 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 SLC7A5P1Q8MH63 180 aa15.09■□□□□ 0.01
LDLR-204ENST00000545707 KBTBD8Q8NFY9 601 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms