RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 EFCAB11Q9BUY7 163 aa11.8□□□□□ -0.52
ACTN1-206ENST00000544964 SHCBP1LQ9BZQ2 653 aa11.8□□□□□ -0.52
ACTN1-206ENST00000544964 EHD1Q9H4M9 534 aa11.8□□□□□ -0.52
ACTN1-206ENST00000544964 SOX17Q9H6I2 414 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-206ENST00000544964 ZNF490Q9ULM2 529 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-206ENST00000544964 BIRC5O15392 142 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 P2RX6O15547 441 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 KLHL41O60662 606 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SRPX2O60687 465 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 OTCP00480 354 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SERPIND1P05546 499 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 PCNAP12004 261 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 COL8A1P27658 744 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 CASP2P42575 452 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 OR1D4P47884 311 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SLC18A1P54219 525 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 RELAQ04206 551 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 PCDH1Q08174 1060 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 ASPHQ12797 758 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 LAPTM5Q13571 262 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 CHI3L2Q15782 390 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 CPSF6Q16630 551 aaKnown RBP eCLIP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 HKDC1Q2TB90 917 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 HSP90B2PQ58FF3 399 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 PAGE2BQ5JRK9 111 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 TCTE1Q5JU00 501 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 LIPJQ5W064 366 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 ZNF787Q6DD87 383 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 GRHL2Q6ISB3 625 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 TMIGD1Q6UXZ0 262 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 FRMD7Q6ZUT3 714 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 CSNK1A1LQ8N752 337 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 PPP1R14CQ8TAE6 165 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SREK1Q8WXA9 508 aaKnown RBP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 RERGQ96A58 199 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 NTMT1Q9BV86 223 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 MID1IP1Q9NPA3 183 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 COPG1Q9Y678 874 aaKnown RBP11.79□□□□□ -0.52
ACTN1-206ENST00000544964 MAU2Q9Y6X3 613 aa11.79□□□□□ -0.52
ACTN1-206ENST00000544964 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 H3BQF6 201 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 UBFD1O14562 309 aaKnown RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 FFAR3O14843 346 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 GPR42O15529 346 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 NEFHP12036 1026 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 CHN1P15882 459 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 BGNP21810 368 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 DCTP40126 519 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 HNF4AP41235 474 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 PPP2R2AP63151 447 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 LCP2Q13094 533 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 E2F2Q14209 437 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 HIST2H2ACQ16777 129 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 CES4AQ5XG92 561 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 HIST2H2AA3Q6FI13 130 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 MED27Q6P2C8 311 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 ASPGQ86U10 573 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 RNF175Q8N4F7 328 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 L3MBTL4Q8NA19 623 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 TTC29Q8NA56 475 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 ST6GALNAC3Q8NDV1 305 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 AGAP11Q8TF27 550 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 SLC13A3Q8WWT9 602 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 CCT6BQ92526 530 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 TM4SF19Q96DZ7 209 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 THAP11Q96EK4 314 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 CNDP1Q96KN2 507 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 KCNA7Q96RP8 456 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 ZNF382Q96SR6 550 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 SARGQ9BW04 601 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 DRC3Q9H069 523 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 NT5DC2Q9H857 520 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 SEMA3GQ9NS98 782 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 ZFP69BQ9UJL9 534 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 RUVBL1Q9Y265 456 aaKnown RBP11.78□□□□□ -0.52
ACTN1-206ENST00000544964 APCP25054 2843 aa11.78□□□□□ -0.52
ACTN1-206ENST00000544964 TEP1Q99973 2627 aaKnown RBP11.77□□□□□ -0.52
ACTN1-206ENST00000544964 IGLV3-12A0A075B6K2 115 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 HYKKA2RU49 373 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 ANKDD1BA6NHY2 528 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 NDUFS4O43181 175 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 NPHS1O60500 1241 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 UGDHO60701 494 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 SH3BGRLO75368 114 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 LYPLA1O75608 230 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-206ENST00000544964 MLYCDO95822 493 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 CHRNGP07510 517 aa11.77□□□□□ -0.53
ACTN1-206ENST00000544964 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms