RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CLCA4Q14CN2 919 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RGNQ15493 299 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TCEA2Q15560 299 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 KLHL22Q53GT1 634 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RSPO2Q6UXX9 243 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 TMIGD1Q6UXZ0 262 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS50-220ENST00000544910 GPR65Q8IYL9 337 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TMEM151AQ8N4L1 468 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 OR4K1Q8NGD4 311 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 GTF2H4Q92759 462 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SLC2A11Q9BYW1 496 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MAT2BQ9NZL9 334 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 UTS2RQ9UKP6 389 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 NEU3Q9UQ49 428 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SCN4AP35499 1836 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3DA0A087WVF3 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3IA0A087WXS9 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3EA0A087X179 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3KA0A087X1G2 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 A0A0J9YVX5 310 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3FA6NER0 549 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3LB9A6J9 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MRPS14O60783 128 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 REM1O75628 298 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3HP0C7X1 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZNF806P0C7X5 589 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ERP29P30040 261 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 DCTP40126 519 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 OR1E2P47887 323 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CENPAP49450 140 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 PLA2G16P53816 162 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RPP38P78345 283 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 IL18Q14116 193 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 LARS2Q15031 903 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 TSTQ16762 297 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3GQ6DHY5 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3CQ6IPX1 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 VITQ6UXI7 678 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TMCO2Q7Z6W1 182 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 TBC1D3Q8IZP1 549 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 OR10G6Q8NH81 332 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZNF675Q8TD23 568 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TRUB1Q8WWH5 349 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZNF689Q96CS4 500 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 SIPA1Q96FS4 1042 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TEX37Q96LM6 180 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CPPED1Q9BRF8 314 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 NECTIN3Q9NQS3 549 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 OLAHQ9NV23 265 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MS4A12Q9NXJ0 267 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ASIC5Q9NY37 505 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TVP23BQ9NYZ1 205 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 AASSQ9UDR5 926 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 HCN4Q9Y3Q4 1203 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TCRBV5S2A0A599 114 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 METTL21EPA6NDL7 271 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RNASET2O00584 256 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 NDUFS4O43181 175 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ABLIM3O94929 683 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ALPLP05186 524 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 LAMP1P11279 417 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 PEPDP12955 493 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 PCGF2P35227 344 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 REEP3Q6NUK4 255 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 KIAA1324Q6UXG2 1013 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 HSD11B1LQ7Z5J1 315 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TICAM1Q8IUC6 712 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 LINC00471Q8N535 108 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ASCC1Q8N9N2 400 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZNF548Q8NEK5 533 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 FAM46DQ8NEK8 389 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 OR14C36Q8NHC7 312 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 LINC01599Q8WXQ3 324 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 OR5P2Q8WZ92 322 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TMEM80Q96HE8 168 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 FCRL4Q96PJ5 515 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 FAM129BQ96TA1 746 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 P2RY13Q9BPV8 354 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RACGAP1Q9H0H5 632 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TAS2R9Q9NYW1 312 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ENPP5Q9UJA9 477 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CFL2Q9Y281 166 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SCN1AP35498 2009 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MCM3APO60318 1980 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 CASKO14936 926 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 KMOO15229 486 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CAPN5O15484 640 aaPredicted RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 NUAK1O60285 661 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CYP7B1O75881 506 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 VIPP01282 170 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MT-ND2P03891 347 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 KLKB1P03952 638 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CDK4P11802 303 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 HLA-EP13747 358 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 HPGDP15428 266 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms