RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 LCMT2O60294 686 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 B4GALT2O60909 372 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 AGFG2O95081 481 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CLDN9O95484 217 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 DDAH2O95865 285 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 OTCP00480 354 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 IFNA16P05015 189 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 F7P08709 466 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 COX6A1P12074 109 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CD46P15529 392 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CLCN2P51788 898 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PLA2G16P53816 162 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 RAB38P57729 211 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 EEF1A2Q05639 463 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ZNF33BQ06732 778 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 DOC2AQ14183 400 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PCBP2Q15366 365 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 KCTD19Q17RG1 926 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SFT2D3Q587I9 215 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CATSPEREQ5SY80 951 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 GRHL2Q6ISB3 625 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PAPD4Q6PIY7 484 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CYP20A1Q6UW02 462 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 IGFL2Q6UWQ7 119 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 TMEM207Q6UWW9 146 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 LINC00696Q6ZRV3 163 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 Q6ZS92 163 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ANKRD37Q7Z713 158 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ISCA2Q86U28 154 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ZC3H7AQ8IWR0 971 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 GPALPP1Q8IXQ4 340 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SAMD14Q8IZD0 417 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 TEX9Q8N6V9 391 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 OR1N1Q8NGS0 311 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 OR14A16Q8NHC5 309 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 UTP15Q8TED0 518 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 TANKQ92844 425 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 MIB2Q96AX9 1013 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 NXNL1Q96CM4 212 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 WDR34Q96EX3 536 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 POM121Q96HA1 1249 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 OR4K3Q96R72 315 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SERPINI1Q99574 410 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 UTP23Q9BRU9 249 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 MFRPQ9BY79 579 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 RHBGQ9H310 441 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 CDC42EP4Q9H3Q1 356 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 ELOVL6Q9H5J4 265 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 RUBCNLQ9H714 662 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PLAC1Q9HBJ0 212 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 OLAHQ9NV23 265 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 LYARQ9NX58 379 aaKnown RBP5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 NINJ2Q9NZG7 142 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PTGFRNQ9P2B2 879 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 DCDC2Q9UHG0 476 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 PSME2Q9UL46 239 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SNX6Q9UNH7 406 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 TSC22D4Q9Y3Q8 395 aa5.28□□□□□ -1.56
CLSTN3-215ENST00000544584 SNRNP200O75643 2136 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MDC1Q14676 2089 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 A0A1B0GUH1 482 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 OR5H15A6NDH6 313 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ANKUB1A6NFN9 424 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SAGE2PA6NJ88 616 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CAPN14A8MX76 684 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 TRIM49D1C9J1S8 452 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 H0YIV9 168 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KLRC4-KLRK1H3BQV0 150 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 UBXN8O00124 270 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PRAMEF2O60811 474 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CTNSO60931 367 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CNOT3O75175 753 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CDC123O75794 336 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SORBS2O94875 1100 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RASAL1O95294 804 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 WISP3O95389 354 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT6AP02538 564 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT6BP04259 564 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CTSBP07858 339 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RHOXF2BP0C7M4 288 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 EDN3P14138 238 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 DDX5P17844 614 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 TNNI3P19429 210 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CPN2P22792 545 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 GRNP28799 593 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 EEF1DP29692 281 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 GDF5P43026 501 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT6CP48668 564 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CYB561P49447 251 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MLLT10P55197 1068 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RAB8AP61006 207 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MAT1AQ00266 395 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PLIN5Q00G26 463 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 OC90Q02509 493 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 IFFO1Q0D2I5 559 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CUL3Q13618 768 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 BMPR2Q13873 1038 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms