RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TUBB8Q3ZCM7 444 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 FAM219BQ5XKK7 198 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 GPRIN3Q6ZVF9 776 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 FAR2Q96K12 515 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 FER1L6-AS2Q96M78 137 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 SLC29A3Q9BZD2 475 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 ROGDIQ9GZN7 287 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 IQCGQ9H095 443 aaKnown RBP18.02■□□□□ 0.48
DDX55-211ENST00000544429 FARSBQ9NSD9 589 aaKnown RBP18.02■□□□□ 0.48
DDX55-211ENST00000544429 FBXL4Q9UKA2 621 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 DAPP1Q9UN19 280 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 COL6A6A6NMZ7 2263 aa18.02■□□□□ 0.47
DDX55-211ENST00000544429 IGKV3D-11A0A0A0MRZ8 115 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 OR2W5A6NFC9 320 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 H3BQF6 201 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 RTCAO00442 366 aaKnown RBP18.01■□□□□ 0.47
DDX55-211ENST00000544429 CYR61O00622 381 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 PEX12O00623 359 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 B3GALT2O43825 422 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 TRIM13O60858 407 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 ALOX12BO75342 701 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 DNAJB5O75953 348 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 HEXBP07686 556 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 COX6A1P12074 109 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 ACPPP15309 386 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 HIST1H1TP22492 207 aaPredicted RBP18.01■□□□□ 0.47
DDX55-211ENST00000544429 CERS1P27544 350 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 LIM2P55344 173 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 PHEXP78562 749 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 CHAF1BQ13112 559 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 KCNAB2Q13303 367 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 CASP8Q14790 479 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 OR4C11Q6IEV9 310 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 QSOX2Q6ZRP7 698 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 ZCCHC7Q8N3Z6 543 aaKnown RBP18.01■□□□□ 0.47
DDX55-211ENST00000544429 ACOT4Q8N9L9 421 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 RGMAQ96B86 450 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 GATA5Q9BWX5 397 aaPredicted RBP18.01■□□□□ 0.47
DDX55-211ENST00000544429 BRF2Q9HAW0 419 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 LYRM4Q9HD34 91 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 SNX6Q9UNH7 406 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 CLDN16Q9Y5I7 305 aa18.01■□□□□ 0.47
DDX55-211ENST00000544429 IGHV1-45A0A0A0MS14 117 aa18■□□□□ 0.47
DDX55-211ENST00000544429 FAM227AF5H4B4 570 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ENO1P06733 434 aaKnown RBP18■□□□□ 0.47
DDX55-211ENST00000544429 C8orf89P0DMQ9 161 aa18■□□□□ 0.47
DDX55-211ENST00000544429 JAK1P23458 1154 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ALDH3A1P30838 453 aa18■□□□□ 0.47
DDX55-211ENST00000544429 BSGP35613 385 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ARL1P40616 181 aaPredicted RBP18■□□□□ 0.47
DDX55-211ENST00000544429 RAB38P57729 211 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ZNF33BQ06732 778 aa18■□□□□ 0.47
DDX55-211ENST00000544429 IFT88Q13099 833 aa18■□□□□ 0.47
DDX55-211ENST00000544429 LY6DQ14210 128 aa18■□□□□ 0.47
DDX55-211ENST00000544429 MINDY4Q4G0A6 757 aa18■□□□□ 0.47
DDX55-211ENST00000544429 MRM1Q6IN84 353 aaKnown RBP18■□□□□ 0.47
DDX55-211ENST00000544429 CCNYL1Q8N7R7 359 aa18■□□□□ 0.47
DDX55-211ENST00000544429 CDYL2Q8N8U2 506 aa18■□□□□ 0.47
DDX55-211ENST00000544429 CCDC63Q8NA47 563 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ADAMTS18Q8TE60 1221 aa18■□□□□ 0.47
DDX55-211ENST00000544429 C8orf44Q96CB5 159 aa18■□□□□ 0.47
DDX55-211ENST00000544429 SERPINI1Q99574 410 aa18■□□□□ 0.47
DDX55-211ENST00000544429 RBCK1Q9BYM8 510 aa18■□□□□ 0.47
DDX55-211ENST00000544429 SEMA4CQ9C0C4 833 aa18■□□□□ 0.47
DDX55-211ENST00000544429 ZNF700Q9H0M5 742 aa18■□□□□ 0.47
DDX55-211ENST00000544429 DDX31Q9H8H2 851 aaKnown RBP18■□□□□ 0.47
DDX55-211ENST00000544429 PCDHGA9Q9Y5G4 932 aaKnown RBP18■□□□□ 0.47
DDX55-211ENST00000544429 SERTM1A2A2V5 107 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 MASP2O00187 686 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 SAP18O00422 153 aaKnown RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 MANBAO00462 879 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 SH3BGRLO75368 114 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 HPP00738 406 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 PDYNP01213 254 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 DHRS4L1P0CG22 281 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 SFTPCP11686 197 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 MPP2Q14168 576 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 PCOLCEQ15113 449 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 AP5B1Q2VPB7 878 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 TCHHL1Q5QJ38 904 aaPredicted RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 LANCL3Q6ZV70 420 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 SCUBE1Q8IWY4 988 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 TMEM52Q8NDY8 209 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 MTFMTQ96DP5 389 aaKnown RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 VPS50Q96JG6 964 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 WDR77Q9BQA1 342 aaPredicted RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 ARHGAP9Q9BRR9 750 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 TRMOQ9BU70 441 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 MECRQ9BV79 373 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 SORBS1Q9BX66 1292 aaKnown RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 ELOVL6Q9H5J4 265 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 COPS7BQ9H9Q2 264 aaPredicted RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 TMBIM4Q9HC24 238 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 TNFRSF12AQ9NP84 129 aa17.99■□□□□ 0.47
DDX55-211ENST00000544429 TNRC6AQ8NDV7 1962 aaKnown RBP17.99■□□□□ 0.47
DDX55-211ENST00000544429 A0A0A6YYD5 115 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 CDC123O75794 336 aaPredicted RBP17.98■□□□□ 0.47
DDX55-211ENST00000544429 BPGMP07738 259 aa17.98■□□□□ 0.47
DDX55-211ENST00000544429 MYZAPP0CAP1 466 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms